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Towards natural language question generation for the validation of ontologies and mappings

Overview of attention for article published in Journal of Biomedical Semantics, August 2016
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Title
Towards natural language question generation for the validation of ontologies and mappings
Published in
Journal of Biomedical Semantics, August 2016
DOI 10.1186/s13326-016-0089-6
Pubmed ID
Authors

Asma Ben Abacha, Julio Cesar Dos Reis, Yassine Mrabet, Cédric Pruski, Marcos Da Silveira

Abstract

The increasing number of open-access ontologies and their key role in several applications such as decision-support systems highlight the importance of their validation. Human expertise is crucial for the validation of ontologies from a domain point-of-view. However, the growing number of ontologies and their fast evolution over time make manual validation challenging. We propose a novel semi-automatic approach based on the generation of natural language (NL) questions to support the validation of ontologies and their evolution. The proposed approach includes the automatic generation, factorization and ordering of NL questions from medical ontologies. The final validation and correction is performed by submitting these questions to domain experts and automatically analyzing their feedback. We also propose a second approach for the validation of mappings impacted by ontology changes. The method exploits the context of the changes to propose correction alternatives presented as Multiple Choice Questions. This research provides a question optimization strategy to maximize the validation of ontology entities with a reduced number of questions. We evaluate our approach for the validation of three medical ontologies. We also evaluate the feasibility and efficiency of our mappings validation approach in the context of ontology evolution. These experiments are performed with different versions of SNOMED-CT and ICD9. The obtained experimental results suggest the feasibility and adequacy of our approach to support the validation of interconnected and evolving ontologies. Results also suggest that taking into account RDFS and OWL entailment helps reducing the number of questions and validation time. The application of our approach to validate mapping evolution also shows the difficulty of adapting mapping evolution over time and highlights the importance of semi-automatic validation.

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Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 52 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Unknown 52 100%

Demographic breakdown

Readers by professional status Count As %
Student > Ph. D. Student 10 19%
Student > Master 9 17%
Researcher 7 13%
Student > Postgraduate 4 8%
Student > Doctoral Student 3 6%
Other 8 15%
Unknown 11 21%
Readers by discipline Count As %
Computer Science 21 40%
Medicine and Dentistry 3 6%
Business, Management and Accounting 2 4%
Nursing and Health Professions 2 4%
Agricultural and Biological Sciences 2 4%
Other 9 17%
Unknown 13 25%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 1. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 10 August 2016.
All research outputs
#20,337,210
of 22,882,389 outputs
Outputs from Journal of Biomedical Semantics
#335
of 364 outputs
Outputs of similar age
#319,401
of 364,241 outputs
Outputs of similar age from Journal of Biomedical Semantics
#8
of 8 outputs
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So far Altmetric has tracked 364 research outputs from this source. They receive a mean Attention Score of 4.6. This one is in the 1st percentile – i.e., 1% of its peers scored the same or lower than it.
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