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ChopSticks: High-resolution analysis of homozygous deletions by exploiting concordant read pairs

Overview of attention for article published in BMC Bioinformatics, October 2012
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Title
ChopSticks: High-resolution analysis of homozygous deletions by exploiting concordant read pairs
Published in
BMC Bioinformatics, October 2012
DOI 10.1186/1471-2105-13-279
Pubmed ID
Authors

Tomohiro Yasuda, Shin Suzuki, Masao Nagasaki, Satoru Miyano

Abstract

Structural variations (SVs) in genomes are commonly observed even in healthy individuals and play key roles in biological functions. To understand their functional impact or to infer molecular mechanisms of SVs, they have to be characterized with the maximum resolution. However, high-resolution analysis is a difficult task because it requires investigation of the complex structures involved in an enormous number of alignments of next-generation sequencing (NGS) reads and genome sequences that contain errors.

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X Demographics

The data shown below were collected from the profile of 1 X user who shared this research output. Click here to find out more about how the information was compiled.
Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 21 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
United States 2 10%
France 1 5%
Unknown 18 86%

Demographic breakdown

Readers by professional status Count As %
Researcher 9 43%
Student > Ph. D. Student 4 19%
Other 4 19%
Student > Master 1 5%
Student > Postgraduate 1 5%
Other 0 0%
Unknown 2 10%
Readers by discipline Count As %
Agricultural and Biological Sciences 10 48%
Computer Science 3 14%
Biochemistry, Genetics and Molecular Biology 2 10%
Medicine and Dentistry 1 5%
Engineering 1 5%
Other 0 0%
Unknown 4 19%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 1. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 09 November 2012.
All research outputs
#18,320,524
of 22,685,926 outputs
Outputs from BMC Bioinformatics
#6,287
of 7,253 outputs
Outputs of similar age
#140,072
of 183,634 outputs
Outputs of similar age from BMC Bioinformatics
#87
of 108 outputs
Altmetric has tracked 22,685,926 research outputs across all sources so far. This one is in the 11th percentile – i.e., 11% of other outputs scored the same or lower than it.
So far Altmetric has tracked 7,253 research outputs from this source. They typically receive a little more attention than average, with a mean Attention Score of 5.4. This one is in the 5th percentile – i.e., 5% of its peers scored the same or lower than it.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 183,634 tracked outputs that were published within six weeks on either side of this one in any source. This one is in the 11th percentile – i.e., 11% of its contemporaries scored the same or lower than it.
We're also able to compare this research output to 108 others from the same source and published within six weeks on either side of this one. This one is in the 5th percentile – i.e., 5% of its contemporaries scored the same or lower than it.