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Establishment of a simple and efficient Agrobacterium-mediated transformation system for Phytophthora palmivora

Overview of attention for article published in BMC Microbiology, September 2016
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Title
Establishment of a simple and efficient Agrobacterium-mediated transformation system for Phytophthora palmivora
Published in
BMC Microbiology, September 2016
DOI 10.1186/s12866-016-0825-1
Pubmed ID
Authors

Dongliang Wu, Natasha Navet, Yingchao Liu, Janice Uchida, Miaoying Tian

Abstract

As an agriculturally important oomycete genus, Phytophthora contains a large number of destructive plant pathogens that severely threaten agricultural production and natural ecosystems. Among them is the broad host range pathogen P. palmivora, which infects many economically important plant species. An essential way to dissect their pathogenesis mechanisms is genetic modification of candidate genes, which requires effective transformation systems. Four methods were developed for transformation of Phytophthora spp., including PEG(polyethylene glycol)/CaCl2 mediated protoplast transformation, electroporation of zoospores, microprojectile bombardment and Agrobacterium-mediated transformation (AMT). Among them, AMT has many advantages over the other methods such as easy handling and mainly generating single-copy integration in the genome. An AMT method previously reported for P. infestans and P. palmivora has barely been used in oomycete research due to low success and low reproducibility. In this study, we report a simple and efficient AMT system for P. palmivora. Using this system, we were able to reproducibly generate over 40 transformants using zoospores collected from culture grown in a single 100 mm-diameter petri dish. The generated GFP transformants constitutively expressed GFP readily detectable using a fluorescence microscope. All of the transformants tested using Southern blot analysis contained a single-copy T-DNA insertion. This system is highly effective and reproducible for transformation of P. palmivora and expected to be adaptable for transformation of additional Phytophthora spp. and other oomycetes. Its establishment will greatly accelerate their functional genomic studies.

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The data shown below were collected from the profiles of 6 X users who shared this research output. Click here to find out more about how the information was compiled.
Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 57 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Unknown 57 100%

Demographic breakdown

Readers by professional status Count As %
Researcher 9 16%
Student > Ph. D. Student 9 16%
Student > Master 7 12%
Student > Doctoral Student 5 9%
Student > Bachelor 5 9%
Other 5 9%
Unknown 17 30%
Readers by discipline Count As %
Agricultural and Biological Sciences 26 46%
Biochemistry, Genetics and Molecular Biology 10 18%
Environmental Science 1 2%
Immunology and Microbiology 1 2%
Chemistry 1 2%
Other 0 0%
Unknown 18 32%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 3. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 08 October 2021.
All research outputs
#7,487,068
of 22,886,568 outputs
Outputs from BMC Microbiology
#860
of 3,196 outputs
Outputs of similar age
#117,464
of 334,695 outputs
Outputs of similar age from BMC Microbiology
#21
of 77 outputs
Altmetric has tracked 22,886,568 research outputs across all sources so far. This one is in the 44th percentile – i.e., 44% of other outputs scored the same or lower than it.
So far Altmetric has tracked 3,196 research outputs from this source. They receive a mean Attention Score of 4.1. This one has gotten more attention than average, scoring higher than 65% of its peers.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 334,695 tracked outputs that were published within six weeks on either side of this one in any source. This one has gotten more attention than average, scoring higher than 50% of its contemporaries.
We're also able to compare this research output to 77 others from the same source and published within six weeks on either side of this one. This one has gotten more attention than average, scoring higher than 72% of its contemporaries.