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Application of RNAi-induced gene expression profiles for prognostic prediction in breast cancer

Overview of attention for article published in Genome Medicine, October 2016
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About this Attention Score

  • Good Attention Score compared to outputs of the same age (66th percentile)

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7 X users

Citations

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Title
Application of RNAi-induced gene expression profiles for prognostic prediction in breast cancer
Published in
Genome Medicine, October 2016
DOI 10.1186/s13073-016-0363-3
Pubmed ID
Authors

Yue Wang, Kenneth M. K. Mark, Matthew H. Ung, Arminja Kettenbach, Todd Miller, Wei Xu, Wenqing Cheng, Tian Xia, Chao Cheng

Abstract

Homologous recombination (HR) is the primary pathway for repairing double-strand DNA breaks implicating in the development of cancer. RNAi-based knockdowns of BRCA1 and RAD51 in this pathway have been performed to investigate the resulting transcriptomic profiles. Here we propose a computational framework to utilize these profiles to calculate a score, named RNA-Interference derived Proliferation Score (RIPS), which reflects cell proliferation ability in individual breast tumors. RIPS is predictive of breast cancer classes, prognosis, genome instability, and neoadjuvant chemosensitivity. This framework directly translates the readout of knockdown experiments into potential clinical applications and generates a robust biomarker in breast cancer.

X Demographics

X Demographics

The data shown below were collected from the profiles of 7 X users who shared this research output. Click here to find out more about how the information was compiled.
Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 29 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Brazil 1 3%
Unknown 28 97%

Demographic breakdown

Readers by professional status Count As %
Student > Ph. D. Student 6 21%
Researcher 4 14%
Professor > Associate Professor 3 10%
Professor 2 7%
Student > Doctoral Student 2 7%
Other 3 10%
Unknown 9 31%
Readers by discipline Count As %
Biochemistry, Genetics and Molecular Biology 8 28%
Medicine and Dentistry 4 14%
Engineering 2 7%
Agricultural and Biological Sciences 1 3%
Computer Science 1 3%
Other 4 14%
Unknown 9 31%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 4. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 11 November 2016.
All research outputs
#6,821,077
of 22,896,955 outputs
Outputs from Genome Medicine
#1,081
of 1,443 outputs
Outputs of similar age
#103,087
of 314,207 outputs
Outputs of similar age from Genome Medicine
#24
of 30 outputs
Altmetric has tracked 22,896,955 research outputs across all sources so far. This one has received more attention than most of these and is in the 69th percentile.
So far Altmetric has tracked 1,443 research outputs from this source. They typically receive a lot more attention than average, with a mean Attention Score of 25.8. This one is in the 24th percentile – i.e., 24% of its peers scored the same or lower than it.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 314,207 tracked outputs that were published within six weeks on either side of this one in any source. This one has gotten more attention than average, scoring higher than 66% of its contemporaries.
We're also able to compare this research output to 30 others from the same source and published within six weeks on either side of this one. This one is in the 20th percentile – i.e., 20% of its contemporaries scored the same or lower than it.