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Complete genome anatomy of the emerging potato pathogen Dickeya solani type strain IPO 2222T

Overview of attention for article published in Environmental Microbiome, November 2016
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Title
Complete genome anatomy of the emerging potato pathogen Dickeya solani type strain IPO 2222T
Published in
Environmental Microbiome, November 2016
DOI 10.1186/s40793-016-0208-0
Pubmed ID
Authors

Slimane Khayi, Pauline Blin, Teik Min Chong, Kok-Gan Chan, Denis Faure

Abstract

Several species of the genus Dickeya provoke soft rot and blackleg diseases on a wide range of plants and crops. Dickeya solani has been identified as the causative agent of diseases outbreaks on potato culture in Europe for the last decade. Here, we report the complete genome of the D. solani IPO 2222(T). Using PacBio and Illumina technologies, a unique circular chromosome of 4,919,833 bp was assembled. The G + C content reaches 56% and the genomic sequence contains 4,059 predicted proteins. The ANI values calculated for D. solani IPO 2222(T) vs. other available D. solani genomes was over 99.9% indicating a high genetic homogeneity within D. solani species.

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Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 20 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
United Kingdom 1 5%
Unknown 19 95%

Demographic breakdown

Readers by professional status Count As %
Student > Master 4 20%
Student > Ph. D. Student 4 20%
Researcher 3 15%
Other 2 10%
Student > Bachelor 2 10%
Other 2 10%
Unknown 3 15%
Readers by discipline Count As %
Agricultural and Biological Sciences 9 45%
Biochemistry, Genetics and Molecular Biology 4 20%
Nursing and Health Professions 1 5%
Computer Science 1 5%
Immunology and Microbiology 1 5%
Other 1 5%
Unknown 3 15%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 1. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 29 November 2016.
All research outputs
#20,655,488
of 25,371,288 outputs
Outputs from Environmental Microbiome
#579
of 786 outputs
Outputs of similar age
#313,642
of 416,841 outputs
Outputs of similar age from Environmental Microbiome
#3
of 7 outputs
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So far Altmetric has tracked 786 research outputs from this source. They receive a mean Attention Score of 4.8. This one is in the 8th percentile – i.e., 8% of its peers scored the same or lower than it.
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