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snp-search: simple processing, manipulation and searching of SNPs from high-throughput sequencing

Overview of attention for article published in BMC Bioinformatics, November 2013
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About this Attention Score

  • In the top 25% of all research outputs scored by Altmetric
  • High Attention Score compared to outputs of the same age (85th percentile)
  • Good Attention Score compared to outputs of the same age and source (79th percentile)

Mentioned by

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15 X users
facebook
1 Facebook page

Citations

dimensions_citation
6 Dimensions

Readers on

mendeley
57 Mendeley
citeulike
3 CiteULike
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Title
snp-search: simple processing, manipulation and searching of SNPs from high-throughput sequencing
Published in
BMC Bioinformatics, November 2013
DOI 10.1186/1471-2105-14-326
Pubmed ID
Authors

Ali Al-Shahib, Anthony Underwood

Abstract

A typical bacterial pathogen genome mapping project can identify thousands of single nucleotide polymorphisms (SNP). Interpreting SNP data is complex and it is difficult to conceptualise the data contained within the large flat files that are the typical output from most SNP calling algorithms. One solution to this problem is to construct a database that can be queried using simple commands so that SNP interrogation and output is both easy and comprehensible.

X Demographics

X Demographics

The data shown below were collected from the profiles of 15 X users who shared this research output. Click here to find out more about how the information was compiled.
Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 57 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
United States 6 11%
France 1 2%
Australia 1 2%
Netherlands 1 2%
United Kingdom 1 2%
Sweden 1 2%
Denmark 1 2%
Belgium 1 2%
Unknown 44 77%

Demographic breakdown

Readers by professional status Count As %
Researcher 20 35%
Student > Master 9 16%
Student > Ph. D. Student 8 14%
Professor 5 9%
Other 4 7%
Other 8 14%
Unknown 3 5%
Readers by discipline Count As %
Agricultural and Biological Sciences 32 56%
Computer Science 9 16%
Biochemistry, Genetics and Molecular Biology 5 9%
Medicine and Dentistry 2 4%
Unspecified 1 2%
Other 4 7%
Unknown 4 7%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 9. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 14 December 2013.
All research outputs
#3,813,662
of 23,340,595 outputs
Outputs from BMC Bioinformatics
#1,415
of 7,388 outputs
Outputs of similar age
#44,107
of 305,152 outputs
Outputs of similar age from BMC Bioinformatics
#22
of 102 outputs
Altmetric has tracked 23,340,595 research outputs across all sources so far. Compared to these this one has done well and is in the 83rd percentile: it's in the top 25% of all research outputs ever tracked by Altmetric.
So far Altmetric has tracked 7,388 research outputs from this source. They typically receive a little more attention than average, with a mean Attention Score of 5.5. This one has done well, scoring higher than 80% of its peers.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 305,152 tracked outputs that were published within six weeks on either side of this one in any source. This one has done well, scoring higher than 85% of its contemporaries.
We're also able to compare this research output to 102 others from the same source and published within six weeks on either side of this one. This one has done well, scoring higher than 79% of its contemporaries.