Title |
Analysis of the intestinal microbiota using SOLiD 16S rRNA gene sequencing and SOLiD shotgun sequencing
|
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Published in |
BMC Genomics, October 2013
|
DOI | 10.1186/1471-2164-14-s5-s16 |
Pubmed ID | |
Authors |
Suparna Mitra, Karin Förster-Fromme, Antje Damms-Machado, Tim Scheurenbrand, Saskia Biskup, Daniel H Huson, Stephan C Bischoff |
Abstract |
Metagenomics seeks to understand microbial communities and assemblages by DNA sequencing. Technological advances in next generation sequencing technologies are fuelling a rapid growth in the number and scope of projects aiming to analyze complex microbial environments such as marine, soil or the gut. Recent improvements in longer read lengths and paired-sequencing allow better resolution in profiling microbial communities. While both 454 sequencing and Illumina sequencing have been used in numerous metagenomic studies, SOLiD sequencing is not commonly used in this area, as it is believed to be more suitable in the context of reference-guided projects. |
X Demographics
Geographical breakdown
Country | Count | As % |
---|---|---|
United States | 1 | 33% |
France | 1 | 33% |
Unknown | 1 | 33% |
Demographic breakdown
Type | Count | As % |
---|---|---|
Members of the public | 2 | 67% |
Scientists | 1 | 33% |
Mendeley readers
Geographical breakdown
Country | Count | As % |
---|---|---|
United States | 4 | 3% |
India | 3 | 2% |
Brazil | 2 | 2% |
Austria | 1 | <1% |
United Kingdom | 1 | <1% |
France | 1 | <1% |
Namibia | 1 | <1% |
Argentina | 1 | <1% |
Unknown | 117 | 89% |
Demographic breakdown
Readers by professional status | Count | As % |
---|---|---|
Student > Master | 27 | 21% |
Researcher | 26 | 20% |
Student > Ph. D. Student | 22 | 17% |
Student > Bachelor | 13 | 10% |
Student > Doctoral Student | 8 | 6% |
Other | 21 | 16% |
Unknown | 14 | 11% |
Readers by discipline | Count | As % |
---|---|---|
Agricultural and Biological Sciences | 65 | 50% |
Biochemistry, Genetics and Molecular Biology | 16 | 12% |
Medicine and Dentistry | 9 | 7% |
Immunology and Microbiology | 8 | 6% |
Computer Science | 7 | 5% |
Other | 10 | 8% |
Unknown | 16 | 12% |