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PileLine: a toolbox to handle genome position information in next-generation sequencing studies

Overview of attention for article published in BMC Bioinformatics, January 2011
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About this Attention Score

  • In the top 25% of all research outputs scored by Altmetric
  • High Attention Score compared to outputs of the same age (82nd percentile)
  • Good Attention Score compared to outputs of the same age and source (79th percentile)

Mentioned by

patent
1 patent
facebook
1 Facebook page
wikipedia
1 Wikipedia page

Citations

dimensions_citation
7 Dimensions

Readers on

mendeley
86 Mendeley
citeulike
23 CiteULike
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Title
PileLine: a toolbox to handle genome position information in next-generation sequencing studies
Published in
BMC Bioinformatics, January 2011
DOI 10.1186/1471-2105-12-31
Pubmed ID
Authors

Daniel Glez-Peña, Gonzalo Gómez-López, Miguel Reboiro-Jato, Florentino Fdez-Riverola, David G Pisano

Abstract

Genomic position (GP) files currently used in next-generation sequencing (NGS) studies are always difficult to manipulate due to their huge size and the lack of appropriate tools to properly manage them. The structure of these flat files is based on representing one line per position that has been covered by at least one aligned read, imposing significant restrictions from a computational performance perspective.

Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 86 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
France 3 3%
United Kingdom 2 2%
United States 2 2%
Japan 2 2%
Brazil 1 1%
Sweden 1 1%
Belgium 1 1%
Australia 1 1%
Germany 1 1%
Other 1 1%
Unknown 71 83%

Demographic breakdown

Readers by professional status Count As %
Researcher 40 47%
Student > Ph. D. Student 10 12%
Other 9 10%
Professor > Associate Professor 7 8%
Student > Bachelor 4 5%
Other 12 14%
Unknown 4 5%
Readers by discipline Count As %
Agricultural and Biological Sciences 55 64%
Computer Science 8 9%
Medicine and Dentistry 6 7%
Biochemistry, Genetics and Molecular Biology 5 6%
Engineering 2 2%
Other 5 6%
Unknown 5 6%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 7. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 12 November 2023.
All research outputs
#5,202,532
of 24,795,084 outputs
Outputs from BMC Bioinformatics
#1,863
of 7,589 outputs
Outputs of similar age
#33,835
of 193,882 outputs
Outputs of similar age from BMC Bioinformatics
#12
of 53 outputs
Altmetric has tracked 24,795,084 research outputs across all sources so far. Compared to these this one has done well and is in the 79th percentile: it's in the top 25% of all research outputs ever tracked by Altmetric.
So far Altmetric has tracked 7,589 research outputs from this source. They typically receive a little more attention than average, with a mean Attention Score of 5.5. This one has done well, scoring higher than 75% of its peers.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 193,882 tracked outputs that were published within six weeks on either side of this one in any source. This one has done well, scoring higher than 82% of its contemporaries.
We're also able to compare this research output to 53 others from the same source and published within six weeks on either side of this one. This one has done well, scoring higher than 79% of its contemporaries.