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Computing the skewness of the phylogenetic mean pairwise distance in linear time

Overview of attention for article published in Algorithms for Molecular Biology, June 2014
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Title
Computing the skewness of the phylogenetic mean pairwise distance in linear time
Published in
Algorithms for Molecular Biology, June 2014
DOI 10.1186/1748-7188-9-15
Pubmed ID
Authors

Constantinos Tsirogiannis, Brody Sandel

Abstract

The phylogenetic Mean Pairwise Distance (MPD) is one of the most popular measures for computing the phylogenetic distance between a given group of species. More specifically, for a phylogenetic tree [Formula: see text] and for a set of species R represented by a subset of the leaf nodes of [Formula: see text], the MPD of R is equal to the average cost of all possible simple paths in [Formula: see text] that connect pairs of nodes in R. Among other phylogenetic measures, the MPD is used as a tool for deciding if the species of a given group R are closely related. To do this, it is important to compute not only the value of the MPD for this group but also the expectation, the variance, and the skewness of this metric. Although efficient algorithms have been developed for computing the expectation and the variance the MPD, there has been no approach so far for computing the skewness of this measure.

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X Demographics

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Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 15 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Russia 1 7%
Unknown 14 93%

Demographic breakdown

Readers by professional status Count As %
Researcher 4 27%
Student > Ph. D. Student 2 13%
Student > Doctoral Student 1 7%
Student > Bachelor 1 7%
Student > Master 1 7%
Other 1 7%
Unknown 5 33%
Readers by discipline Count As %
Agricultural and Biological Sciences 5 33%
Environmental Science 2 13%
Biochemistry, Genetics and Molecular Biology 1 7%
Computer Science 1 7%
Earth and Planetary Sciences 1 7%
Other 0 0%
Unknown 5 33%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 1. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 30 June 2014.
All research outputs
#18,373,874
of 22,757,541 outputs
Outputs from Algorithms for Molecular Biology
#197
of 264 outputs
Outputs of similar age
#163,760
of 228,190 outputs
Outputs of similar age from Algorithms for Molecular Biology
#5
of 5 outputs
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