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Complete genome sequence of Microbulbifer sp. CCB-MM1, a halophile isolated from Matang Mangrove Forest, Malaysia

Overview of attention for article published in Environmental Microbiome, July 2017
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Title
Complete genome sequence of Microbulbifer sp. CCB-MM1, a halophile isolated from Matang Mangrove Forest, Malaysia
Published in
Environmental Microbiome, July 2017
DOI 10.1186/s40793-017-0248-0
Pubmed ID
Authors

Tsu Horng Moh, Nyok-Sean Lau, Go Furusawa, Al-Ashraf Abdullah Amirul

Abstract

Microbulbifer sp. CCB-MM1 is a halophile isolated from estuarine sediment of Matang Mangrove Forest, Malaysia. Based on 16S rRNA gene sequence analysis, strain CCB-MM1 is a potentially new species of genus Microbulbifer. Here we describe its features and present its complete genome sequence with annotation. The genome sequence is 3.86 Mb in size with GC content of 58.85%, harbouring 3313 protein coding genes and 92 RNA genes. A total of 71 genes associated with carbohydrate active enzymes were found using dbCAN. Ectoine biosynthetic genes, ectABC operon and ask_ect were detected using antiSMASH 3.0. Cell shape determination genes, mreBCD operon, rodA and rodZ were annotated, congruent with the rod-coccus cell cycle of the strain CCB-MM1. In addition, putative mreBCD operon regulatory gene, bolA was detected, which might be associated with the regulation of rod-coccus cell cycle observed from the strain.

Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 35 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Unknown 35 100%

Demographic breakdown

Readers by professional status Count As %
Researcher 4 11%
Student > Ph. D. Student 4 11%
Student > Bachelor 3 9%
Student > Doctoral Student 2 6%
Student > Postgraduate 2 6%
Other 6 17%
Unknown 14 40%
Readers by discipline Count As %
Biochemistry, Genetics and Molecular Biology 7 20%
Agricultural and Biological Sciences 5 14%
Immunology and Microbiology 3 9%
Environmental Science 1 3%
Arts and Humanities 1 3%
Other 3 9%
Unknown 15 43%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 1. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 07 September 2017.
All research outputs
#17,292,294
of 25,382,440 outputs
Outputs from Environmental Microbiome
#493
of 786 outputs
Outputs of similar age
#208,730
of 326,018 outputs
Outputs of similar age from Environmental Microbiome
#5
of 6 outputs
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So far Altmetric has tracked 786 research outputs from this source. They receive a mean Attention Score of 4.8. This one is in the 30th percentile – i.e., 30% of its peers scored the same or lower than it.
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