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Promoters from the itaconate cluster of Ustilago maydis are induced by nitrogen depletion

Overview of attention for article published in Fungal Biology and Biotechnology, November 2017
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Title
Promoters from the itaconate cluster of Ustilago maydis are induced by nitrogen depletion
Published in
Fungal Biology and Biotechnology, November 2017
DOI 10.1186/s40694-017-0040-3
Pubmed ID
Authors

Thiemo Zambanini, Sandra K. Hartmann, Lisa M. Schmitz, Linda Büttner, Hamed Hosseinpour Tehrani, Elena Geiser, Melanie Beudels, Dominik Venc, Georg Wandrey, Jochen Büchs, Markus Schwarzländer, Lars M. Blank, Nick Wierckx

Abstract

Ustilago maydis is known for its natural potential to produce a broad range of valuable chemicals, such as itaconate, from both industrial carbon waste streams and renewable biomass. Production of itaconate, and many other secondary metabolites, is induced by nitrogen limitation in U. maydis. The clustered genes responsible for itaconate production have recently been identified, enabling the development of new expression tools that are compatible with biotechnological processes. Here we report on the investigation of two of the native promoters, P tad1 and P mtt1 , from the itaconate cluster of U. maydis MB215. For both promoters the specific activation upon nitrogen limitation, which is known to be the trigger for itaconate production in Ustilago, could be demonstrated by gfp expression. The promoters cover a broad range of expression levels, especially when combined with the possibility to create single- and multicopy construct integration events. In addition, these reporter constructs enable a functional characterization of gene induction patterns associated with itaconate production. The promoters are well suited to induce gene expression in response to nitrogen limitation, coupled to the itaconate production phase, which contributes towards the further improvement of organic acid production with Ustilago.

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Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 34 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Unknown 34 100%

Demographic breakdown

Readers by professional status Count As %
Student > Bachelor 6 18%
Researcher 4 12%
Student > Ph. D. Student 4 12%
Student > Master 3 9%
Student > Doctoral Student 3 9%
Other 4 12%
Unknown 10 29%
Readers by discipline Count As %
Biochemistry, Genetics and Molecular Biology 14 41%
Agricultural and Biological Sciences 5 15%
Chemical Engineering 2 6%
Engineering 2 6%
Unknown 11 32%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 2. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 29 November 2017.
All research outputs
#13,882,258
of 23,009,818 outputs
Outputs from Fungal Biology and Biotechnology
#99
of 143 outputs
Outputs of similar age
#223,640
of 438,547 outputs
Outputs of similar age from Fungal Biology and Biotechnology
#5
of 7 outputs
Altmetric has tracked 23,009,818 research outputs across all sources so far. This one is in the 38th percentile – i.e., 38% of other outputs scored the same or lower than it.
So far Altmetric has tracked 143 research outputs from this source. They typically receive more attention than average, with a mean Attention Score of 8.0. This one is in the 28th percentile – i.e., 28% of its peers scored the same or lower than it.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 438,547 tracked outputs that were published within six weeks on either side of this one in any source. This one is in the 47th percentile – i.e., 47% of its contemporaries scored the same or lower than it.
We're also able to compare this research output to 7 others from the same source and published within six weeks on either side of this one. This one has scored higher than 2 of them.