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Interspecific and intraspecific gene variability in a 1-Mb region containing the highest density of NBS-LRR genes found in the melon genome

Overview of attention for article published in BMC Genomics, December 2014
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Title
Interspecific and intraspecific gene variability in a 1-Mb region containing the highest density of NBS-LRR genes found in the melon genome
Published in
BMC Genomics, December 2014
DOI 10.1186/1471-2164-15-1131
Pubmed ID
Authors

Víctor M González, Núria Aventín, Emilio Centeno, Pere Puigdomènech

Abstract

Plant NBS-LRR pathogen-resistance genes tend to be found in clusters, which have been shown to be hot spots of genome variability, particularly in the form of presence/absence gene variation. In melon, half of the 81 predicted NBS-LRR genes group in nine clusters, and a 1 Mb region on linkage group V contains the highest density of R-genes and the highest concentration of PAV polymorphisms found in the melon genome. This region has been shown to contain the locus of Vat, an agronomically important gene that confers resistance to aphids. However, the presence of duplications makes the sequencing of R-gene clusters and their subsequent annotation difficult, usually resulting in multi-gapped sequences with higher than average errors.

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Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 43 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
United States 1 2%
Uruguay 1 2%
France 1 2%
Unknown 40 93%

Demographic breakdown

Readers by professional status Count As %
Researcher 11 26%
Student > Ph. D. Student 10 23%
Student > Master 7 16%
Professor > Associate Professor 5 12%
Student > Bachelor 3 7%
Other 2 5%
Unknown 5 12%
Readers by discipline Count As %
Agricultural and Biological Sciences 29 67%
Biochemistry, Genetics and Molecular Biology 9 21%
Unknown 5 12%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 1. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 13 August 2015.
All research outputs
#15,313,289
of 22,775,504 outputs
Outputs from BMC Genomics
#6,684
of 10,642 outputs
Outputs of similar age
#195,852
of 331,266 outputs
Outputs of similar age from BMC Genomics
#153
of 242 outputs
Altmetric has tracked 22,775,504 research outputs across all sources so far. This one is in the 22nd percentile – i.e., 22% of other outputs scored the same or lower than it.
So far Altmetric has tracked 10,642 research outputs from this source. They receive a mean Attention Score of 4.7. This one is in the 29th percentile – i.e., 29% of its peers scored the same or lower than it.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 331,266 tracked outputs that were published within six weeks on either side of this one in any source. This one is in the 31st percentile – i.e., 31% of its contemporaries scored the same or lower than it.
We're also able to compare this research output to 242 others from the same source and published within six weeks on either side of this one. This one is in the 29th percentile – i.e., 29% of its contemporaries scored the same or lower than it.