Title |
Whole genome de novo assemblies of three divergent strains of rice, Oryza sativa, document novel gene space of aus and indica
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Published in |
Genome Biology, December 2014
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DOI | 10.1186/s13059-014-0506-z |
Pubmed ID | |
Authors |
Michael C Schatz, Lyza G Maron, Joshua C Stein, Alejandro Hernandez Wences, James Gurtowski, Eric Biggers, Hayan Lee, Melissa Kramer, Eric Antoniou, Elena Ghiban, Mark H Wright, Jer-ming Chia, Doreen Ware, Susan R McCouch, W Richard McCombie |
Abstract |
The use of high throughput genome-sequencing technologies has uncovered a large extent of structural variation in eukaryotic genomes that makes important contributions to genomic diversity and phenotypic variation. When the genomes of different strains of a given organism are compared, whole genome resequencing data are typically aligned to an established reference sequence. However, when the reference differs in significant structural ways from the individuals under study, the analysis is often incomplete or inaccurate. |
X Demographics
Geographical breakdown
Country | Count | As % |
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Hong Kong | 1 | 50% |
Unknown | 1 | 50% |
Demographic breakdown
Type | Count | As % |
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Members of the public | 1 | 50% |
Science communicators (journalists, bloggers, editors) | 1 | 50% |
Mendeley readers
Geographical breakdown
Country | Count | As % |
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United States | 3 | 1% |
France | 2 | <1% |
Philippines | 2 | <1% |
Brazil | 1 | <1% |
India | 1 | <1% |
Uruguay | 1 | <1% |
Sri Lanka | 1 | <1% |
Malaysia | 1 | <1% |
Taiwan | 1 | <1% |
Other | 1 | <1% |
Unknown | 254 | 95% |
Demographic breakdown
Readers by professional status | Count | As % |
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Researcher | 64 | 24% |
Student > Ph. D. Student | 54 | 20% |
Student > Master | 22 | 8% |
Student > Bachelor | 17 | 6% |
Student > Doctoral Student | 14 | 5% |
Other | 46 | 17% |
Unknown | 51 | 19% |
Readers by discipline | Count | As % |
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Agricultural and Biological Sciences | 150 | 56% |
Biochemistry, Genetics and Molecular Biology | 41 | 15% |
Computer Science | 11 | 4% |
Medicine and Dentistry | 2 | <1% |
Chemistry | 2 | <1% |
Other | 5 | 2% |
Unknown | 57 | 21% |