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Comparing adaptive and fixed bandwidth-based kernel density estimates in spatial cancer epidemiology

Overview of attention for article published in International Journal of Health Geographics, March 2015
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Title
Comparing adaptive and fixed bandwidth-based kernel density estimates in spatial cancer epidemiology
Published in
International Journal of Health Geographics, March 2015
DOI 10.1186/s12942-015-0005-9
Pubmed ID
Authors

Dorothea Lemke, Volkmar Mattauch, Oliver Heidinger, Edzer Pebesma, Hans-Werner Hense

Abstract

Monitoring spatial disease risk (e.g. identifying risk areas) is of great relevance in public health research, especially in cancer epidemiology. A common strategy uses case-control studies and estimates a spatial relative risk function (sRRF) via kernel density estimation (KDE). This study was set up to evaluate the sRRF estimation methods, comparing fixed with adaptive bandwidth-based KDE, and how they were able to detect 'risk areas' with case data from a population-based cancer registry. The sRRF were estimated within a defined area, using locational information on incident cancer cases and on a spatial sample of controls, drawn from a high-resolution population grid recognized as underestimating the resident population in urban centers. The spatial extensions of these areas with underestimated resident population were quantified with population reference data and used in this study as 'true risk areas'. Sensitivity and specificity analyses were conducted by spatial overlay of the 'true risk areas' and the significant (α=.05) p-contour lines obtained from the sRRF. We observed that the fixed bandwidth-based sRRF was distinguished by a conservative behavior in identifying these urban 'risk areas', that is, a reduced sensitivity but increased specificity due to oversmoothing as compared to the adaptive risk estimator. In contrast, the latter appeared more competitive through variance stabilization, resulting in a higher sensitivity, while the specificity was equal as compared to the fixed risk estimator. Halving the originally determined bandwidths led to a simultaneous improvement of sensitivity and specificity of the adaptive sRRF, while the specificity was reduced for the fixed estimator. The fixed risk estimator contrasts with an oversmoothing tendency in urban areas, while overestimating the risk in rural areas. The use of an adaptive bandwidth regime attenuated this pattern, but led in general to a higher false positive rate, because, in our study design, the majority of true risk areas were located in urban areas. However, there is a strong need for further optimizing the bandwidth selection methods, especially for the adaptive sRRF.

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Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 48 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Czechia 1 2%
Unknown 47 98%

Demographic breakdown

Readers by professional status Count As %
Student > Ph. D. Student 10 21%
Researcher 8 17%
Student > Master 5 10%
Student > Doctoral Student 4 8%
Student > Postgraduate 4 8%
Other 10 21%
Unknown 7 15%
Readers by discipline Count As %
Medicine and Dentistry 9 19%
Social Sciences 4 8%
Earth and Planetary Sciences 4 8%
Agricultural and Biological Sciences 4 8%
Computer Science 4 8%
Other 12 25%
Unknown 11 23%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 1. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 29 May 2015.
All research outputs
#16,371,088
of 24,119,703 outputs
Outputs from International Journal of Health Geographics
#458
of 638 outputs
Outputs of similar age
#162,105
of 268,647 outputs
Outputs of similar age from International Journal of Health Geographics
#5
of 7 outputs
Altmetric has tracked 24,119,703 research outputs across all sources so far. This one is in the 21st percentile – i.e., 21% of other outputs scored the same or lower than it.
So far Altmetric has tracked 638 research outputs from this source. They typically receive more attention than average, with a mean Attention Score of 9.5. This one is in the 22nd percentile – i.e., 22% of its peers scored the same or lower than it.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 268,647 tracked outputs that were published within six weeks on either side of this one in any source. This one is in the 31st percentile – i.e., 31% of its contemporaries scored the same or lower than it.
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