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Hepatitis B surface gene variants isolated from blood donors with overt and occult HBV infection in north eastern Egypt

Overview of attention for article published in Virology Journal, September 2015
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Title
Hepatitis B surface gene variants isolated from blood donors with overt and occult HBV infection in north eastern Egypt
Published in
Virology Journal, September 2015
DOI 10.1186/s12985-015-0389-y
Pubmed ID
Authors

Rania Kishk, Nader Nemr, Abeer Elkady, Mohamed Mandour, Mohamed Aboelmagd, Nevene Ramsis, Mohamed Hassan, Nashaat Soliman, Sayuki Iijima, Shuko Murakami, Yasuhito Tanaka, Mostafa Ragheb

Abstract

Major hydrophilic region in genomic HBV extending from aa99 to aa169, clustered with a highly conformational epitope, is critical to the antigenicity of hepatitis B surface antigen (HBsAg) and may affect the diagnosis of HBV in HBV screening test. So, this study aimed to characterize variants of S gene product of hepatitis B virus (HBV) isolated from patients with overt or occult HBV infection in north-eastern Egypt. The study included sera of two different groups of volunteer blood donors (VBDs), 82 with overt HBV that were positive for HBsAg and anti-HBc and 343 donors negative for HBsAg eligible for donation. Of the latter group, only 44 were positive for anti-HBc. All anti-HBc positive sera were subjected to HBV DNA detection and partial sequence analysis targeting the HBV S gene. HBV DNA was detected in 22.7 % of HBsAg-/anti-HBc + (10/44 patients) and in 90 % of HBsAg + donors (74/82 patients) with significant statistical difference (P = 0.0001). Phylogenetic analysis showed that HBV strains retrieved from both groups were of genotype D. Amino acid escape mutation T125M was detected in only 2 samples of the occult infection group and in none of the overt group (P = 0.01). Different amino acid substitutions were identified in overt infection group: S143L/T (16.2 %, 12/74) and P120T/S (2.7 %, 2/74). Q129R was significantly more frequent in cases with occult HBV infection (40 %, 4/10) than overt group (6.8 %, 5/74) (P = 0.01). HBV genotype D predominated both in patients with overt and occult HBV infection. Different profiles of amino acid substitutions in the major hydrophilic region were seen in these two groups in Egypt.

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The data shown below were collected from the profiles of 3 X users who shared this research output. Click here to find out more about how the information was compiled.
Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 36 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Colombia 1 3%
Unknown 35 97%

Demographic breakdown

Readers by professional status Count As %
Student > Master 6 17%
Researcher 5 14%
Professor > Associate Professor 3 8%
Other 2 6%
Student > Postgraduate 2 6%
Other 6 17%
Unknown 12 33%
Readers by discipline Count As %
Medicine and Dentistry 6 17%
Immunology and Microbiology 6 17%
Biochemistry, Genetics and Molecular Biology 5 14%
Agricultural and Biological Sciences 4 11%
Unspecified 1 3%
Other 2 6%
Unknown 12 33%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 2. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 01 October 2015.
All research outputs
#15,332,207
of 23,577,761 outputs
Outputs from Virology Journal
#1,856
of 3,120 outputs
Outputs of similar age
#153,526
of 275,803 outputs
Outputs of similar age from Virology Journal
#35
of 57 outputs
Altmetric has tracked 23,577,761 research outputs across all sources so far. This one is in the 32nd percentile – i.e., 32% of other outputs scored the same or lower than it.
So far Altmetric has tracked 3,120 research outputs from this source. They typically receive a lot more attention than average, with a mean Attention Score of 25.8. This one is in the 36th percentile – i.e., 36% of its peers scored the same or lower than it.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 275,803 tracked outputs that were published within six weeks on either side of this one in any source. This one is in the 41st percentile – i.e., 41% of its contemporaries scored the same or lower than it.
We're also able to compare this research output to 57 others from the same source and published within six weeks on either side of this one. This one is in the 31st percentile – i.e., 31% of its contemporaries scored the same or lower than it.