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Efficient pairwise RNA structure prediction and alignment using sequence alignment constraints

Overview of attention for article published in BMC Bioinformatics, September 2006
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About this Attention Score

  • Good Attention Score compared to outputs of the same age (69th percentile)
  • Good Attention Score compared to outputs of the same age and source (72nd percentile)

Mentioned by

twitter
2 X users
wikipedia
1 Wikipedia page

Citations

dimensions_citation
110 Dimensions

Readers on

mendeley
79 Mendeley
citeulike
10 CiteULike
connotea
4 Connotea
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Title
Efficient pairwise RNA structure prediction and alignment using sequence alignment constraints
Published in
BMC Bioinformatics, September 2006
DOI 10.1186/1471-2105-7-400
Pubmed ID
Authors

Robin D Dowell, Sean R Eddy

Abstract

We are interested in the problem of predicting secondary structure for small sets of homologous RNAs, by incorporating limited comparative sequence information into an RNA folding model. The Sankoff algorithm for simultaneous RNA folding and alignment is a basis for approaches to this problem. There are two open problems in applying a Sankoff algorithm: development of a good unified scoring system for alignment and folding and development of practical heuristics for dealing with the computational complexity of the algorithm.

X Demographics

X Demographics

The data shown below were collected from the profiles of 2 X users who shared this research output. Click here to find out more about how the information was compiled.
Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 79 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
United States 3 4%
France 2 3%
Italy 1 1%
Germany 1 1%
Argentina 1 1%
Brazil 1 1%
Greece 1 1%
China 1 1%
Unknown 68 86%

Demographic breakdown

Readers by professional status Count As %
Student > Ph. D. Student 23 29%
Researcher 15 19%
Professor > Associate Professor 9 11%
Student > Master 9 11%
Student > Bachelor 6 8%
Other 11 14%
Unknown 6 8%
Readers by discipline Count As %
Agricultural and Biological Sciences 36 46%
Computer Science 13 16%
Biochemistry, Genetics and Molecular Biology 9 11%
Mathematics 2 3%
Immunology and Microbiology 2 3%
Other 8 10%
Unknown 9 11%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 5. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 06 March 2012.
All research outputs
#6,196,094
of 22,663,969 outputs
Outputs from BMC Bioinformatics
#2,380
of 7,246 outputs
Outputs of similar age
#20,381
of 66,863 outputs
Outputs of similar age from BMC Bioinformatics
#10
of 37 outputs
Altmetric has tracked 22,663,969 research outputs across all sources so far. This one has received more attention than most of these and is in the 72nd percentile.
So far Altmetric has tracked 7,246 research outputs from this source. They typically receive a little more attention than average, with a mean Attention Score of 5.4. This one has gotten more attention than average, scoring higher than 66% of its peers.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 66,863 tracked outputs that were published within six weeks on either side of this one in any source. This one has gotten more attention than average, scoring higher than 69% of its contemporaries.
We're also able to compare this research output to 37 others from the same source and published within six weeks on either side of this one. This one has gotten more attention than average, scoring higher than 72% of its contemporaries.