@bicknell_l @drjulie_b @10xGenomics @kinghorngenomes We did 10X Genomics Chromium Linked read sequencing in humans in this paper https://t.co/0lJOUlvVqw I worked only on the computational analysis, but if you find this useful, I can put you in touch with o
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Wow, this SNP from the 1000 Genomes can't possibly be accurate. Anyone know what causes such a bizarre pattern? Imputation error (a known issue: https://t.co/I4ZvRm67Vi)? And has someone made a list of variants with similar problems? https://t.co/fTAbyInxD
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@ZaminIqbal @mathiesoniain We did an analysis for this for a few individuals from the 1000 Genomes project and found mostly slight improvement when using whole 1000G vs only corresponding population groups. (Fig 10). https://t.co/0lJOUlvVqw
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RT @Jose_Oliver: Phasing and imputation for rare variants are unreliable, which likely reflects the limited sample size of the 1000 Genomes…