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A novel approach for multi-SNP GWAS and its application in Alzheimer’s disease

Overview of attention for article published in BMC Bioinformatics, July 2016
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About this Attention Score

  • In the top 25% of all research outputs scored by Altmetric
  • Good Attention Score compared to outputs of the same age (77th percentile)
  • Good Attention Score compared to outputs of the same age and source (76th percentile)

Mentioned by

news
1 news outlet

Citations

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13 Dimensions

Readers on

mendeley
50 Mendeley
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Title
A novel approach for multi-SNP GWAS and its application in Alzheimer’s disease
Published in
BMC Bioinformatics, July 2016
DOI 10.1186/s12859-016-1093-7
Pubmed ID
Authors

Paul M. Bodily, M. Stanley Fujimoto, Justin T. Page, Mark J. Clement, Mark T. W. Ebbert, Perry G. Ridge, the Alzheimer’s Disease Neuroimaging Initiative

Abstract

Genome-wide association studies (GWAS) have effectively identified genetic factors for many diseases. Many diseases, including Alzheimer's disease (AD), have epistatic causes, requiring more sophisticated analyses to identify groups of variants which together affect phenotype. Based on the GWAS statistical model, we developed a multi-SNP GWAS analysis to identify pairs of variants whose common occurrence signaled the Alzheimer's disease phenotype. Despite not having sufficient data to demonstrate significance, our preliminary experimentation identified a high correlation between GRIA3 and HLA-DRB5 (an AD gene). GRIA3 has not been previously reported in association with AD, but is known to play a role in learning and memory.

Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 50 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Germany 1 2%
Italy 1 2%
Unknown 48 96%

Demographic breakdown

Readers by professional status Count As %
Student > Ph. D. Student 12 24%
Student > Master 8 16%
Researcher 6 12%
Student > Bachelor 3 6%
Professor 3 6%
Other 7 14%
Unknown 11 22%
Readers by discipline Count As %
Agricultural and Biological Sciences 12 24%
Neuroscience 8 16%
Biochemistry, Genetics and Molecular Biology 7 14%
Medicine and Dentistry 4 8%
Computer Science 3 6%
Other 4 8%
Unknown 12 24%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 7. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 30 July 2016.
All research outputs
#4,191,741
of 22,881,964 outputs
Outputs from BMC Bioinformatics
#1,617
of 7,298 outputs
Outputs of similar age
#76,432
of 365,443 outputs
Outputs of similar age from BMC Bioinformatics
#23
of 99 outputs
Altmetric has tracked 22,881,964 research outputs across all sources so far. Compared to these this one has done well and is in the 80th percentile: it's in the top 25% of all research outputs ever tracked by Altmetric.
So far Altmetric has tracked 7,298 research outputs from this source. They typically receive a little more attention than average, with a mean Attention Score of 5.4. This one has done well, scoring higher than 77% of its peers.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 365,443 tracked outputs that were published within six weeks on either side of this one in any source. This one has done well, scoring higher than 77% of its contemporaries.
We're also able to compare this research output to 99 others from the same source and published within six weeks on either side of this one. This one has done well, scoring higher than 76% of its contemporaries.