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The transcriptional landscape of the deep-sea bacterium Photobacterium profundum in both a toxR mutant and its parental strain

Overview of attention for article published in BMC Genomics, October 2012
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Title
The transcriptional landscape of the deep-sea bacterium Photobacterium profundum in both a toxR mutant and its parental strain
Published in
BMC Genomics, October 2012
DOI 10.1186/1471-2164-13-567
Pubmed ID
Authors

Stefano Campanaro, Fabio De Pascale, Andrea Telatin, Riccardo Schiavon, Douglas H Bartlett, Giorgio Valle

Abstract

The deep-sea bacterium Photobacterium profundum is an established model for studying high pressure adaptation. In this paper we analyse the parental strain DB110 and the toxR mutant TW30 by massively parallel cDNA sequencing (RNA-seq). ToxR is a transmembrane DNA-binding protein first discovered in Vibrio cholerae, where it regulates a considerable number of genes involved in environmental adaptation and virulence. In P. profundum the abundance and activity of this protein is influenced by hydrostatic pressure and its role is related to the regulation of genes in a pressure-dependent manner.

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The data shown below were collected from the profiles of 2 X users who shared this research output. Click here to find out more about how the information was compiled.
Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 39 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Germany 1 3%
Chile 1 3%
France 1 3%
United Kingdom 1 3%
United States 1 3%
Unknown 34 87%

Demographic breakdown

Readers by professional status Count As %
Student > Ph. D. Student 11 28%
Researcher 11 28%
Student > Postgraduate 4 10%
Student > Master 4 10%
Student > Bachelor 2 5%
Other 5 13%
Unknown 2 5%
Readers by discipline Count As %
Agricultural and Biological Sciences 21 54%
Biochemistry, Genetics and Molecular Biology 10 26%
Environmental Science 2 5%
Social Sciences 1 3%
Medicine and Dentistry 1 3%
Other 0 0%
Unknown 4 10%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 1. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 29 October 2012.
All research outputs
#20,674,485
of 25,394,764 outputs
Outputs from BMC Genomics
#8,715
of 11,250 outputs
Outputs of similar age
#158,264
of 202,277 outputs
Outputs of similar age from BMC Genomics
#152
of 199 outputs
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So far Altmetric has tracked 11,250 research outputs from this source. They receive a mean Attention Score of 4.8. This one is in the 12th percentile – i.e., 12% of its peers scored the same or lower than it.
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