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Effort required to finish shotgun-generated genome sequences differs significantly among vertebrates

Overview of attention for article published in BMC Genomics, January 2010
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About this Attention Score

  • In the top 25% of all research outputs scored by Altmetric
  • High Attention Score compared to outputs of the same age (87th percentile)
  • High Attention Score compared to outputs of the same age and source (88th percentile)

Mentioned by

blogs
1 blog

Citations

dimensions_citation
10 Dimensions

Readers on

mendeley
34 Mendeley
citeulike
6 CiteULike
connotea
1 Connotea
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Title
Effort required to finish shotgun-generated genome sequences differs significantly among vertebrates
Published in
BMC Genomics, January 2010
DOI 10.1186/1471-2164-11-21
Pubmed ID
Authors

Robert W Blakesley, Nancy F Hansen, Jyoti Gupta, Jennifer C McDowell, Baishali Maskeri, Beatrice B Barnabas, Shelise Y Brooks, Holly Coleman, Payam Haghighi, Shi-Ling Ho, Karen Schandler, Sirintorn Stantripop, Jennifer L Vogt, Pamela J Thomas, NISC Comparative Sequencing Program, Gerard G Bouffard, Eric D Green

Abstract

The approaches for shotgun-based sequencing of vertebrate genomes are now well-established, and have resulted in the generation of numerous draft whole-genome sequence assemblies. In contrast, the process of refining those assemblies to improve contiguity and increase accuracy (known as 'sequence finishing') remains tedious, labor-intensive, and expensive. As a result, the vast majority of vertebrate genome sequences generated to date remain at a draft stage.

Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 34 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
United States 4 12%
Germany 1 3%
Brazil 1 3%
Norway 1 3%
Canada 1 3%
Sweden 1 3%
Unknown 25 74%

Demographic breakdown

Readers by professional status Count As %
Researcher 19 56%
Student > Ph. D. Student 6 18%
Other 3 9%
Student > Master 2 6%
Student > Bachelor 1 3%
Other 3 9%
Readers by discipline Count As %
Agricultural and Biological Sciences 28 82%
Biochemistry, Genetics and Molecular Biology 3 9%
Physics and Astronomy 1 3%
Medicine and Dentistry 1 3%
Unknown 1 3%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 9. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 26 January 2010.
All research outputs
#3,258,599
of 22,705,019 outputs
Outputs from BMC Genomics
#1,279
of 10,624 outputs
Outputs of similar age
#17,488
of 164,146 outputs
Outputs of similar age from BMC Genomics
#11
of 118 outputs
Altmetric has tracked 22,705,019 research outputs across all sources so far. Compared to these this one has done well and is in the 84th percentile: it's in the top 25% of all research outputs ever tracked by Altmetric.
So far Altmetric has tracked 10,624 research outputs from this source. They receive a mean Attention Score of 4.7. This one has done well, scoring higher than 87% of its peers.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 164,146 tracked outputs that were published within six weeks on either side of this one in any source. This one has done well, scoring higher than 87% of its contemporaries.
We're also able to compare this research output to 118 others from the same source and published within six weeks on either side of this one. This one has done well, scoring higher than 88% of its contemporaries.