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ContigScape: a Cytoscape plugin facilitating microbial genome gap closing

Overview of attention for article published in BMC Genomics, April 2013
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About this Attention Score

  • In the top 25% of all research outputs scored by Altmetric
  • High Attention Score compared to outputs of the same age (87th percentile)
  • High Attention Score compared to outputs of the same age and source (90th percentile)

Mentioned by

twitter
11 X users
patent
1 patent
wikipedia
1 Wikipedia page

Citations

dimensions_citation
31 Dimensions

Readers on

mendeley
72 Mendeley
citeulike
5 CiteULike
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Title
ContigScape: a Cytoscape plugin facilitating microbial genome gap closing
Published in
BMC Genomics, April 2013
DOI 10.1186/1471-2164-14-289
Pubmed ID
Authors

Biao Tang, Qi Wang, Minjun Yang, Feng Xie, Yongqiang Zhu, Ying Zhuo, Shengyue Wang, Hong Gao, Xiaoming Ding, Lixin Zhang, Guoping Zhao, Huajun Zheng

Abstract

With the emergence of next-generation sequencing, the availability of prokaryotic genome sequences is expanding rapidly. A total of 5,276 genomes have been released since 2008, yet only 1,692 genomes were complete. The final phase of microbial genome sequencing, particularly gap closing, is frequently the rate-limiting step either because of complex genomic structures that cause sequence bias even with high genomic coverage, or the presence of repeat sequences that may cause gaps in assembly.

X Demographics

X Demographics

The data shown below were collected from the profiles of 11 X users who shared this research output. Click here to find out more about how the information was compiled.
Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 72 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Germany 2 3%
India 2 3%
Norway 1 1%
Sweden 1 1%
Mexico 1 1%
Belgium 1 1%
Spain 1 1%
United States 1 1%
Unknown 62 86%

Demographic breakdown

Readers by professional status Count As %
Researcher 20 28%
Student > Ph. D. Student 14 19%
Student > Bachelor 8 11%
Student > Master 7 10%
Student > Doctoral Student 5 7%
Other 13 18%
Unknown 5 7%
Readers by discipline Count As %
Agricultural and Biological Sciences 40 56%
Biochemistry, Genetics and Molecular Biology 9 13%
Computer Science 5 7%
Medicine and Dentistry 3 4%
Engineering 2 3%
Other 5 7%
Unknown 8 11%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 11. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 12 March 2015.
All research outputs
#2,689,061
of 22,708,120 outputs
Outputs from BMC Genomics
#932
of 10,624 outputs
Outputs of similar age
#23,550
of 192,344 outputs
Outputs of similar age from BMC Genomics
#11
of 120 outputs
Altmetric has tracked 22,708,120 research outputs across all sources so far. Compared to these this one has done well and is in the 87th percentile: it's in the top 25% of all research outputs ever tracked by Altmetric.
So far Altmetric has tracked 10,624 research outputs from this source. They receive a mean Attention Score of 4.7. This one has done particularly well, scoring higher than 91% of its peers.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 192,344 tracked outputs that were published within six weeks on either side of this one in any source. This one has done well, scoring higher than 87% of its contemporaries.
We're also able to compare this research output to 120 others from the same source and published within six weeks on either side of this one. This one has done particularly well, scoring higher than 90% of its contemporaries.