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Comprehensive analysis of RNA-seq data reveals the complexity of the transcriptome in Brassica rapa

Overview of attention for article published in BMC Genomics, October 2013
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  • Above-average Attention Score compared to outputs of the same age and source (56th percentile)

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3 X users

Citations

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160 Dimensions

Readers on

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116 Mendeley
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2 CiteULike
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Title
Comprehensive analysis of RNA-seq data reveals the complexity of the transcriptome in Brassica rapa
Published in
BMC Genomics, October 2013
DOI 10.1186/1471-2164-14-689
Pubmed ID
Authors

Chaobo Tong, Xiaowu Wang, Jingyin Yu, Jian Wu, Wanshun Li, Junyan Huang, Caihua Dong, Wei Hua, Shengyi Liu

Abstract

The species Brassica rapa (2n=20, AA) is an important vegetable and oilseed crop, and serves as an excellent model for genomic and evolutionary research in Brassica species. With the availability of whole genome sequence of B. rapa, it is essential to further determine the activity of all functional elements of the B. rapa genome and explore the transcriptome on a genome-wide scale. Here, RNA-seq data was employed to provide a genome-wide transcriptional landscape and characterization of the annotated and novel transcripts and alternative splicing events across tissues.

X Demographics

X Demographics

The data shown below were collected from the profiles of 3 X users who shared this research output. Click here to find out more about how the information was compiled.
Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 116 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
United States 2 2%
Netherlands 1 <1%
Malaysia 1 <1%
China 1 <1%
Canada 1 <1%
Unknown 110 95%

Demographic breakdown

Readers by professional status Count As %
Student > Ph. D. Student 22 19%
Researcher 22 19%
Student > Master 16 14%
Professor > Associate Professor 11 9%
Student > Bachelor 7 6%
Other 13 11%
Unknown 25 22%
Readers by discipline Count As %
Agricultural and Biological Sciences 63 54%
Biochemistry, Genetics and Molecular Biology 20 17%
Linguistics 1 <1%
Environmental Science 1 <1%
Computer Science 1 <1%
Other 1 <1%
Unknown 29 25%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 2. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 23 October 2013.
All research outputs
#14,762,521
of 22,725,280 outputs
Outputs from BMC Genomics
#6,116
of 10,628 outputs
Outputs of similar age
#124,078
of 209,115 outputs
Outputs of similar age from BMC Genomics
#60
of 151 outputs
Altmetric has tracked 22,725,280 research outputs across all sources so far. This one is in the 32nd percentile – i.e., 32% of other outputs scored the same or lower than it.
So far Altmetric has tracked 10,628 research outputs from this source. They receive a mean Attention Score of 4.7. This one is in the 37th percentile – i.e., 37% of its peers scored the same or lower than it.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 209,115 tracked outputs that were published within six weeks on either side of this one in any source. This one is in the 38th percentile – i.e., 38% of its contemporaries scored the same or lower than it.
We're also able to compare this research output to 151 others from the same source and published within six weeks on either side of this one. This one has gotten more attention than average, scoring higher than 56% of its contemporaries.