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Detection and classification of peaks in 5' cap RNA sequencing data

Overview of attention for article published in BMC Genomics, October 2013
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  • Above-average Attention Score compared to outputs of the same age and source (61st percentile)

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2 X users

Citations

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26 Mendeley
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Title
Detection and classification of peaks in 5' cap RNA sequencing data
Published in
BMC Genomics, October 2013
DOI 10.1186/1471-2164-14-s5-s9
Pubmed ID
Authors

Dario Strbenac, Nicola J Armstrong, Jean YH Yang

Abstract

The large-scale sequencing of 5' cap enriched cDNA promises to reveal the diversity of transcription initiation across entire genomes. The process of transcription is noisy, and there is often no single, exact start site. This creates the need for a fast and simple method of identifying transcription start peaks based on this type of data. Due to both biological and technical noise, many of the peaks seen are not real transcription initiation events. Classification of the observed peaks is an essential filtering step in the discovery of genuine initiation locations.

X Demographics

X Demographics

The data shown below were collected from the profiles of 2 X users who shared this research output. Click here to find out more about how the information was compiled.
Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 26 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Unknown 26 100%

Demographic breakdown

Readers by professional status Count As %
Student > Doctoral Student 7 27%
Researcher 5 19%
Student > Master 4 15%
Student > Ph. D. Student 4 15%
Student > Bachelor 3 12%
Other 2 8%
Unknown 1 4%
Readers by discipline Count As %
Biochemistry, Genetics and Molecular Biology 12 46%
Agricultural and Biological Sciences 7 27%
Computer Science 3 12%
Engineering 2 8%
Social Sciences 1 4%
Other 0 0%
Unknown 1 4%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 2. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 31 October 2014.
All research outputs
#14,573,335
of 23,342,664 outputs
Outputs from BMC Genomics
#5,776
of 10,744 outputs
Outputs of similar age
#119,834
of 212,271 outputs
Outputs of similar age from BMC Genomics
#54
of 145 outputs
Altmetric has tracked 23,342,664 research outputs across all sources so far. This one is in the 35th percentile – i.e., 35% of other outputs scored the same or lower than it.
So far Altmetric has tracked 10,744 research outputs from this source. They receive a mean Attention Score of 4.7. This one is in the 42nd percentile – i.e., 42% of its peers scored the same or lower than it.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 212,271 tracked outputs that were published within six weeks on either side of this one in any source. This one is in the 41st percentile – i.e., 41% of its contemporaries scored the same or lower than it.
We're also able to compare this research output to 145 others from the same source and published within six weeks on either side of this one. This one has gotten more attention than average, scoring higher than 61% of its contemporaries.