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Genome analysis of Pseudoalteromonas flavipulchra JG1 reveals various survival advantages in marine environment

Overview of attention for article published in BMC Genomics, October 2013
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Title
Genome analysis of Pseudoalteromonas flavipulchra JG1 reveals various survival advantages in marine environment
Published in
BMC Genomics, October 2013
DOI 10.1186/1471-2164-14-707
Pubmed ID
Authors

Min Yu, Kaihao Tang, Jiwen Liu, Xiaochong Shi, Tobias AM Gulder, Xiao-Hua Zhang

Abstract

Competition between bacteria for habitat and resources is very common in the natural environment and is considered to be a selective force for survival. Many strains of the genus Pseudoalteromonas were confirmed to produce bioactive compounds that provide those advantages over their competitors. In our previous study, P. flavipulchra JG1 was found to synthesize a Pseudoalteromonas flavipulchra antibacterial Protein (PfaP) with L-amino acid oxidase activity and five small chemical compounds, which were the main competitive agents of the strain. In addition, the genome of this bacterium has been previously sequenced as Whole Genome Shotgun project (PMID: 22740664). In this study, more extensive genomic analysis was performed to identify specific genes or gene clusters which related to its competitive feature, and further experiments were carried out to confirm the physiological roles of these genes when competing with other microorganisms in marine environment.

X Demographics

X Demographics

The data shown below were collected from the profile of 1 X user who shared this research output. Click here to find out more about how the information was compiled.
Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 60 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
India 1 2%
Denmark 1 2%
Unknown 58 97%

Demographic breakdown

Readers by professional status Count As %
Student > Ph. D. Student 17 28%
Researcher 10 17%
Student > Bachelor 6 10%
Student > Master 5 8%
Student > Doctoral Student 4 7%
Other 7 12%
Unknown 11 18%
Readers by discipline Count As %
Agricultural and Biological Sciences 26 43%
Biochemistry, Genetics and Molecular Biology 8 13%
Chemistry 3 5%
Environmental Science 2 3%
Immunology and Microbiology 2 3%
Other 4 7%
Unknown 15 25%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 1. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 17 October 2013.
All research outputs
#21,264,673
of 23,881,329 outputs
Outputs from BMC Genomics
#9,455
of 10,793 outputs
Outputs of similar age
#189,060
of 213,596 outputs
Outputs of similar age from BMC Genomics
#113
of 142 outputs
Altmetric has tracked 23,881,329 research outputs across all sources so far. This one is in the 1st percentile – i.e., 1% of other outputs scored the same or lower than it.
So far Altmetric has tracked 10,793 research outputs from this source. They receive a mean Attention Score of 4.8. This one is in the 1st percentile – i.e., 1% of its peers scored the same or lower than it.
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We're also able to compare this research output to 142 others from the same source and published within six weeks on either side of this one. This one is in the 1st percentile – i.e., 1% of its contemporaries scored the same or lower than it.