Title |
MaTSE: the gene expression time-series explorer
|
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Published in |
BMC Bioinformatics, November 2013
|
DOI | 10.1186/1471-2105-14-s19-s1 |
Pubmed ID | |
Authors |
Paul Craig, Alan Cannon, Robert Kukla, Jessie Kennedy |
Abstract |
High throughput gene expression time-course experiments provide a perspective on biological functioning recognized as having huge value for the diagnosis, treatment, and prevention of diseases. There are however significant challenges to properly exploiting this data due to its massive scale and complexity. In particular, existing techniques are found to be ill suited to finding patterns of changing activity over a limited interval of an experiments time frame. The Time-Series Explorer (TSE) was developed to overcome this limitation by allowing users to explore their data by controlling an animated scatter-plot view. MaTSE improves and extends TSE by allowing users to visualize data with missing values, cross reference multiple conditions, highlight gene groupings, and collaborate by sharing their findings. |
Mendeley readers
Geographical breakdown
Country | Count | As % |
---|---|---|
United States | 2 | 7% |
United Kingdom | 1 | 3% |
Unknown | 27 | 90% |
Demographic breakdown
Readers by professional status | Count | As % |
---|---|---|
Researcher | 7 | 23% |
Student > Ph. D. Student | 5 | 17% |
Student > Master | 4 | 13% |
Student > Bachelor | 3 | 10% |
Other | 3 | 10% |
Other | 4 | 13% |
Unknown | 4 | 13% |
Readers by discipline | Count | As % |
---|---|---|
Computer Science | 9 | 30% |
Agricultural and Biological Sciences | 5 | 17% |
Engineering | 4 | 13% |
Biochemistry, Genetics and Molecular Biology | 2 | 7% |
Arts and Humanities | 2 | 7% |
Other | 3 | 10% |
Unknown | 5 | 17% |