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A bioinformatic analysis of ribonucleotide reductase genes in phage genomes and metagenomes

Overview of attention for article published in BMC Ecology and Evolution, February 2013
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Title
A bioinformatic analysis of ribonucleotide reductase genes in phage genomes and metagenomes
Published in
BMC Ecology and Evolution, February 2013
DOI 10.1186/1471-2148-13-33
Pubmed ID
Authors

Bhakti Dwivedi, Bingjie Xue, Daniel Lundin, Robert A Edwards, Mya Breitbart

Abstract

Ribonucleotide reductase (RNR), the enzyme responsible for the formation of deoxyribonucleotides from ribonucleotides, is found in all domains of life and many viral genomes. RNRs are also amongst the most abundant genes identified in environmental metagenomes. This study focused on understanding the distribution, diversity, and evolution of RNRs in phages (viruses that infect bacteria). Hidden Markov Model profiles were used to analyze the proteins encoded by 685 completely sequenced double-stranded DNA phages and 22 environmental viral metagenomes to identify RNR homologs in cultured phages and uncultured viral communities, respectively.

X Demographics

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The data shown below were collected from the profile of 1 X user who shared this research output. Click here to find out more about how the information was compiled.
Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 167 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Brazil 4 2%
Australia 1 <1%
South Africa 1 <1%
Canada 1 <1%
Belgium 1 <1%
Unknown 159 95%

Demographic breakdown

Readers by professional status Count As %
Student > Ph. D. Student 36 22%
Researcher 30 18%
Student > Bachelor 18 11%
Student > Master 17 10%
Student > Doctoral Student 14 8%
Other 21 13%
Unknown 31 19%
Readers by discipline Count As %
Agricultural and Biological Sciences 74 44%
Biochemistry, Genetics and Molecular Biology 23 14%
Immunology and Microbiology 10 6%
Environmental Science 9 5%
Chemistry 4 2%
Other 13 8%
Unknown 34 20%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 1. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 23 December 2013.
All research outputs
#17,286,379
of 25,374,647 outputs
Outputs from BMC Ecology and Evolution
#2,929
of 3,714 outputs
Outputs of similar age
#193,700
of 291,036 outputs
Outputs of similar age from BMC Ecology and Evolution
#57
of 74 outputs
Altmetric has tracked 25,374,647 research outputs across all sources so far. This one is in the 21st percentile – i.e., 21% of other outputs scored the same or lower than it.
So far Altmetric has tracked 3,714 research outputs from this source. They typically receive a lot more attention than average, with a mean Attention Score of 12.5. This one is in the 14th percentile – i.e., 14% of its peers scored the same or lower than it.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 291,036 tracked outputs that were published within six weeks on either side of this one in any source. This one is in the 24th percentile – i.e., 24% of its contemporaries scored the same or lower than it.
We're also able to compare this research output to 74 others from the same source and published within six weeks on either side of this one. This one is in the 13th percentile – i.e., 13% of its contemporaries scored the same or lower than it.