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U12 intron positions are more strongly conserved between animals and plants than U2 intron positions

Overview of attention for article published in Biology Direct, May 2008
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Title
U12 intron positions are more strongly conserved between animals and plants than U2 intron positions
Published in
Biology Direct, May 2008
DOI 10.1186/1745-6150-3-19
Pubmed ID
Authors

Malay Kumar Basu, Wojciech Makalowski, Igor B Rogozin, Eugene V Koonin

Abstract

We report that the positions of minor, U12 introns are conserved in orthologous genes from human and Arabidopsis to an even greater extent than the positions of the major, U2 introns. The U12 introns, especially, conserved ones are concentrated in 5'-portions of plant and animal genes, where the U12 to U2 conversions occurs preferentially in the 3'-portions of genes. These results are compatible with the hypothesis that the high level of conservation of U12 intron positions and their persistence in genomes despite the unidirectional U12 to U2 conversion are explained by the role of the slowly excised U12 introns in down-regulation of gene expression.

Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 40 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
United Kingdom 1 3%
Sweden 1 3%
Germany 1 3%
Unknown 37 93%

Demographic breakdown

Readers by professional status Count As %
Researcher 12 30%
Student > Ph. D. Student 8 20%
Student > Doctoral Student 4 10%
Professor 3 8%
Professor > Associate Professor 2 5%
Other 4 10%
Unknown 7 18%
Readers by discipline Count As %
Agricultural and Biological Sciences 18 45%
Biochemistry, Genetics and Molecular Biology 12 30%
Computer Science 1 3%
Medicine and Dentistry 1 3%
Engineering 1 3%
Other 0 0%
Unknown 7 18%