↓ Skip to main content

Codon insertion and deletion functions as a somatic diversification mechanism in human antibody repertoires

Overview of attention for article published in Biology Direct, August 2006
Altmetric Badge

Mentioned by

patent
1 patent

Citations

dimensions_citation
23 Dimensions

Readers on

mendeley
28 Mendeley
citeulike
1 CiteULike
You are seeing a free-to-access but limited selection of the activity Altmetric has collected about this research output. Click here to find out more.
Title
Codon insertion and deletion functions as a somatic diversification mechanism in human antibody repertoires
Published in
Biology Direct, August 2006
DOI 10.1186/1745-6150-1-24
Pubmed ID
Authors

Donald C Reason, Jianhui Zhou

Abstract

It has been suggested that codon insertion and/or deletion may represent a mechanism that, along with hypermutation, contributes to the affinity maturation of antibodies. We used repertoire cloning to examine human antibodies directed against 3 carbohydrate antigens and 1 protein antigen for the presence of such modifications. We find that both the insertion and deletion of codons occur frequently in antigen-specific responses following vaccination. Codon insertions and deletions were observed most often in the complementarity determining regions, and less frequently in the framework regions, of VH, Vkappa, and Vlambda gene segments, and involved motifs known to be preferred targets of somatic hypermutation. Clonal lineage analysis shows that these events occur through out the course of the somatic maturation of individual antibody clones. We also determined that these alterations of paratope structure have varying effects on the relative affinity of the binding site for its cognate antigen.

Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 28 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
India 1 4%
United States 1 4%
Argentina 1 4%
Unknown 25 89%

Demographic breakdown

Readers by professional status Count As %
Student > Ph. D. Student 8 29%
Researcher 8 29%
Professor 2 7%
Other 2 7%
Student > Master 1 4%
Other 3 11%
Unknown 4 14%
Readers by discipline Count As %
Biochemistry, Genetics and Molecular Biology 7 25%
Agricultural and Biological Sciences 7 25%
Medicine and Dentistry 4 14%
Pharmacology, Toxicology and Pharmaceutical Science 2 7%
Computer Science 1 4%
Other 2 7%
Unknown 5 18%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 3. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 10 September 2020.
All research outputs
#8,535,472
of 25,374,917 outputs
Outputs from Biology Direct
#269
of 537 outputs
Outputs of similar age
#31,048
of 90,748 outputs
Outputs of similar age from Biology Direct
#4
of 5 outputs
Altmetric has tracked 25,374,917 research outputs across all sources so far. This one is in the 43rd percentile – i.e., 43% of other outputs scored the same or lower than it.
So far Altmetric has tracked 537 research outputs from this source. They typically receive a lot more attention than average, with a mean Attention Score of 10.3. This one is in the 43rd percentile – i.e., 43% of its peers scored the same or lower than it.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 90,748 tracked outputs that were published within six weeks on either side of this one in any source. This one is in the 13th percentile – i.e., 13% of its contemporaries scored the same or lower than it.
We're also able to compare this research output to 5 others from the same source and published within six weeks on either side of this one.