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Fish the ChIPs: a pipeline for automated genomic annotation of ChIP-Seq data

Overview of attention for article published in Biology Direct, October 2011
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Title
Fish the ChIPs: a pipeline for automated genomic annotation of ChIP-Seq data
Published in
Biology Direct, October 2011
DOI 10.1186/1745-6150-6-51
Pubmed ID
Authors

Iros Barozzi, Alberto Termanini, Saverio Minucci, Gioacchino Natoli

Abstract

High-throughput sequencing is generating massive amounts of data at a pace that largely exceeds the throughput of data analysis routines. Here we introduce Fish the ChIPs (FC), a computational pipeline aimed at a broad public of users and designed to perform complete ChIP-Seq data analysis of an unlimited number of samples, thus increasing throughput, reproducibility and saving time.

Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 71 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
United States 2 3%
Poland 1 1%
Italy 1 1%
Germany 1 1%
Unknown 66 93%

Demographic breakdown

Readers by professional status Count As %
Researcher 23 32%
Student > Ph. D. Student 15 21%
Professor 7 10%
Other 6 8%
Student > Master 6 8%
Other 11 15%
Unknown 3 4%
Readers by discipline Count As %
Agricultural and Biological Sciences 36 51%
Biochemistry, Genetics and Molecular Biology 17 24%
Computer Science 3 4%
Arts and Humanities 2 3%
Social Sciences 2 3%
Other 7 10%
Unknown 4 6%