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Genome analyses of the carboxydotrophic sulfate-reducers Desulfotomaculum nigrificans and Desulfotomaculum carboxydivorans and reclassification of Desulfotomaculum caboxydivorans as a later synonym…

Overview of attention for article published in Environmental Microbiome, June 2014
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Title
Genome analyses of the carboxydotrophic sulfate-reducers Desulfotomaculum nigrificans and Desulfotomaculum carboxydivorans and reclassification of Desulfotomaculum caboxydivorans as a later synonym of Desulfotomaculum nigrificans
Published in
Environmental Microbiome, June 2014
DOI 10.4056/sigs.4718645
Pubmed ID
Authors

Michael Visser, Sofiya N. Parshina, Joana I. Alves, Diana Z. Sousa, Inês A. C. Pereira, Gerard Muyzer, Jan Kuever, Alexander V. Lebedinsky, Jasper J. Koehorst, Petra Worm, Caroline M. Plugge, Peter J. Schaap, Lynne A. Goodwin, Alla Lapidus, Nikos C. Kyrpides, Janine C. Detter, Tanja Woyke, Patrick Chain, Karen W. Davenport, Stefan Spring, Manfred Rohde, Hans Peter Klenk, Alfons J. M. Stams

Abstract

Desulfotomaculum nigrificans and D. carboxydivorans are moderately thermophilic members of the polyphyletic spore-forming genus Desulfotomaculum in the family Peptococcaceae. They are phylogenetically very closely related and belong to 'subgroup a' of the Desulfotomaculum cluster 1. D. nigrificans and D. carboxydivorans have a similar growth substrate spectrum; they can grow with glucose and fructose as electron donors in the presence of sulfate. Additionally, both species are able to ferment fructose, although fermentation of glucose is only reported for D. carboxydivorans. D. nigrificans is able to grow with 20% carbon monoxide (CO) coupled to sulfate reduction, while D. carboxydivorans can grow at 100% CO with and without sulfate. Hydrogen is produced during growth with CO by D. carboxydivorans. Here we present a summary of the features of D. nigrificans and D. carboxydivorans together with the description of the complete genome sequencing and annotation of both strains. Moreover, we compared the genomes of both strains to reveal their differences. This comparison led us to propose a reclassification of D. carboxydivorans as a later heterotypic synonym of D. nigrificans.

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Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 45 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Germany 2 4%
United Kingdom 1 2%
Unknown 42 93%

Demographic breakdown

Readers by professional status Count As %
Student > Ph. D. Student 10 22%
Researcher 8 18%
Professor > Associate Professor 4 9%
Student > Master 4 9%
Other 3 7%
Other 8 18%
Unknown 8 18%
Readers by discipline Count As %
Agricultural and Biological Sciences 13 29%
Biochemistry, Genetics and Molecular Biology 11 24%
Immunology and Microbiology 8 18%
Energy 2 4%
Environmental Science 1 2%
Other 1 2%
Unknown 9 20%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 1. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 24 February 2014.
All research outputs
#20,655,488
of 25,371,288 outputs
Outputs from Environmental Microbiome
#579
of 786 outputs
Outputs of similar age
#177,909
of 242,885 outputs
Outputs of similar age from Environmental Microbiome
#34
of 49 outputs
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