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Billions of basepairs of recently expanded, repetitive sequences are eliminated from the somatic genome during copepod development

Overview of attention for article published in BMC Genomics, March 2014
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  • Above-average Attention Score compared to outputs of the same age and source (57th percentile)

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Title
Billions of basepairs of recently expanded, repetitive sequences are eliminated from the somatic genome during copepod development
Published in
BMC Genomics, March 2014
DOI 10.1186/1471-2164-15-186
Pubmed ID
Authors

Cheng Sun, Grace Wyngaard, D Brian Walton, Holly A Wichman, Rachel Lockridge Mueller

Abstract

Chromatin diminution is the programmed deletion of DNA from presomatic cell or nuclear lineages during development, producing single organisms that contain two different nuclear genomes. Phylogenetically diverse taxa undergo chromatin diminution--some ciliates, nematodes, copepods, and vertebrates. In cyclopoid copepods, chromatin diminution occurs in taxa with massively expanded germline genomes; depending on species, germline genome sizes range from 15 - 75 Gb, 12-74 Gb of which are lost from pre-somatic cell lineages at germline--soma differentiation. This is more than an order of magnitude more sequence than is lost from other taxa. To date, the sequences excised from copepods have not been analyzed using large-scale genomic datasets, and the processes underlying germline genomic gigantism in this clade, as well as the functional significance of chromatin diminution, have remained unknown.

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X Demographics

The data shown below were collected from the profiles of 3 X users who shared this research output. Click here to find out more about how the information was compiled.
Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 131 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Germany 1 <1%
Canada 1 <1%
Unknown 129 98%

Demographic breakdown

Readers by professional status Count As %
Student > Ph. D. Student 10 8%
Researcher 8 6%
Student > Master 5 4%
Professor 4 3%
Professor > Associate Professor 3 2%
Other 6 5%
Unknown 95 73%
Readers by discipline Count As %
Agricultural and Biological Sciences 18 14%
Biochemistry, Genetics and Molecular Biology 9 7%
Environmental Science 3 2%
Business, Management and Accounting 1 <1%
Earth and Planetary Sciences 1 <1%
Other 0 0%
Unknown 99 76%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 2. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 13 March 2014.
All research outputs
#13,903,378
of 23,577,654 outputs
Outputs from BMC Genomics
#5,121
of 10,787 outputs
Outputs of similar age
#111,437
of 222,266 outputs
Outputs of similar age from BMC Genomics
#56
of 146 outputs
Altmetric has tracked 23,577,654 research outputs across all sources so far. This one is in the 39th percentile – i.e., 39% of other outputs scored the same or lower than it.
So far Altmetric has tracked 10,787 research outputs from this source. They receive a mean Attention Score of 4.7. This one is in the 49th percentile – i.e., 49% of its peers scored the same or lower than it.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 222,266 tracked outputs that were published within six weeks on either side of this one in any source. This one is in the 48th percentile – i.e., 48% of its contemporaries scored the same or lower than it.
We're also able to compare this research output to 146 others from the same source and published within six weeks on either side of this one. This one has gotten more attention than average, scoring higher than 57% of its contemporaries.