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Jane: a new tool for the cophylogeny reconstruction problem

Overview of attention for article published in Algorithms for Molecular Biology, February 2010
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About this Attention Score

  • In the top 25% of all research outputs scored by Altmetric
  • Among the highest-scoring outputs from this source (#36 of 264)
  • High Attention Score compared to outputs of the same age (84th percentile)
  • High Attention Score compared to outputs of the same age and source (80th percentile)

Mentioned by

blogs
1 blog

Citations

dimensions_citation
345 Dimensions

Readers on

mendeley
260 Mendeley
citeulike
2 CiteULike
connotea
1 Connotea
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Title
Jane: a new tool for the cophylogeny reconstruction problem
Published in
Algorithms for Molecular Biology, February 2010
DOI 10.1186/1748-7188-5-16
Pubmed ID
Authors

Chris Conow, Daniel Fielder, Yaniv Ovadia, Ran Libeskind-Hadas

Abstract

This paper describes the theory and implementation of a new software tool, called Jane, for the study of historical associations. This problem arises in parasitology (associations of hosts and parasites), molecular systematics (associations of orderings and genes), and biogeography (associations of regions and orderings). The underlying problem is that of reconciling pairs of trees subject to biologically plausible events and costs associated with these events. Existing software tools for this problem have strengths and limitations, and the new Jane tool described here provides functionality that complements existing tools.

Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 260 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
United States 6 2%
Spain 3 1%
Germany 2 <1%
Australia 2 <1%
United Kingdom 2 <1%
France 1 <1%
Sweden 1 <1%
Colombia 1 <1%
Turkey 1 <1%
Other 2 <1%
Unknown 239 92%

Demographic breakdown

Readers by professional status Count As %
Student > Ph. D. Student 60 23%
Researcher 48 18%
Student > Master 43 17%
Student > Bachelor 21 8%
Professor > Associate Professor 15 6%
Other 50 19%
Unknown 23 9%
Readers by discipline Count As %
Agricultural and Biological Sciences 148 57%
Biochemistry, Genetics and Molecular Biology 31 12%
Computer Science 14 5%
Environmental Science 12 5%
Immunology and Microbiology 5 2%
Other 18 7%
Unknown 32 12%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 7. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 12 March 2014.
All research outputs
#4,406,443
of 22,747,498 outputs
Outputs from Algorithms for Molecular Biology
#36
of 264 outputs
Outputs of similar age
#26,296
of 165,219 outputs
Outputs of similar age from Algorithms for Molecular Biology
#1
of 5 outputs
Altmetric has tracked 22,747,498 research outputs across all sources so far. Compared to these this one has done well and is in the 80th percentile: it's in the top 25% of all research outputs ever tracked by Altmetric.
So far Altmetric has tracked 264 research outputs from this source. They receive a mean Attention Score of 3.2. This one has done well, scoring higher than 86% of its peers.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 165,219 tracked outputs that were published within six weeks on either side of this one in any source. This one has done well, scoring higher than 84% of its contemporaries.
We're also able to compare this research output to 5 others from the same source and published within six weeks on either side of this one. This one has scored higher than all of them