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Patterns of homoeologous gene expression shown by RNA sequencing in hexaploid bread wheat

Overview of attention for article published in BMC Genomics, April 2014
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Title
Patterns of homoeologous gene expression shown by RNA sequencing in hexaploid bread wheat
Published in
BMC Genomics, April 2014
DOI 10.1186/1471-2164-15-276
Pubmed ID
Authors

Lindsey J Leach, Eric J Belfield, Caifu Jiang, Carly Brown, Aziz Mithani, Nicholas P Harberd

Abstract

Bread wheat (Triticum aestivum) has a large, complex and hexaploid genome consisting of A, B and D homoeologous chromosome sets. Therefore each wheat gene potentially exists as a trio of A, B and D homoeoloci, each of which may contribute differentially to wheat phenotypes. We describe a novel approach combining wheat cytogenetic resources (chromosome substitution 'nullisomic-tetrasomic' lines) with next generation deep sequencing of gene transcripts (RNA-Seq), to directly and accurately identify homoeologue-specific single nucleotide variants and quantify the relative contribution of individual homoeoloci to gene expression.

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The data shown below were collected from the profiles of 2 X users who shared this research output. Click here to find out more about how the information was compiled.
Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 117 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
United Kingdom 2 2%
United States 1 <1%
Netherlands 1 <1%
Australia 1 <1%
Unknown 112 96%

Demographic breakdown

Readers by professional status Count As %
Student > Ph. D. Student 33 28%
Researcher 32 27%
Student > Master 8 7%
Student > Doctoral Student 7 6%
Student > Bachelor 7 6%
Other 18 15%
Unknown 12 10%
Readers by discipline Count As %
Agricultural and Biological Sciences 79 68%
Biochemistry, Genetics and Molecular Biology 17 15%
Unspecified 1 <1%
Economics, Econometrics and Finance 1 <1%
Social Sciences 1 <1%
Other 2 2%
Unknown 16 14%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 1. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 19 May 2014.
All research outputs
#17,719,424
of 22,753,345 outputs
Outputs from BMC Genomics
#7,546
of 10,636 outputs
Outputs of similar age
#156,956
of 226,967 outputs
Outputs of similar age from BMC Genomics
#104
of 168 outputs
Altmetric has tracked 22,753,345 research outputs across all sources so far. This one is in the 19th percentile – i.e., 19% of other outputs scored the same or lower than it.
So far Altmetric has tracked 10,636 research outputs from this source. They receive a mean Attention Score of 4.7. This one is in the 23rd percentile – i.e., 23% of its peers scored the same or lower than it.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 226,967 tracked outputs that were published within six weeks on either side of this one in any source. This one is in the 27th percentile – i.e., 27% of its contemporaries scored the same or lower than it.
We're also able to compare this research output to 168 others from the same source and published within six weeks on either side of this one. This one is in the 32nd percentile – i.e., 32% of its contemporaries scored the same or lower than it.