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Calculated conformer energies for organic molecules with multiple polar functionalities are method dependent: Taxol (case study)

Overview of attention for article published in BMC Molecular and Cell Biology, October 2001
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Title
Calculated conformer energies for organic molecules with multiple polar functionalities are method dependent: Taxol (case study)
Published in
BMC Molecular and Cell Biology, October 2001
DOI 10.1186/1472-6769-1-2
Pubmed ID
Authors

Ami Lakdawala, Minmin Wang, Neysa Nevins, Dennis C Liotta, Danuta Rusinska-Roszak, Marek Lozynski, James P Snyder

Abstract

BACKGROUND: Molecular mechanics (MM) and quantum chemical (QM) calculations are widely applied and powerful tools for the stereochemical and conformational investigations of molecules. The same methods have been extensively used to probe the conformational profile of Taxol (Figure 1) both in solution and at the beta-tubulin protein binding site. RESULTS: In the present work, the relative energies of seven conformations of Taxol derived from NMR and X-ray analyses were compared with a set of widely used force fields and semiempirical MO methods coupled to a continuum solvent treatment. The procedures not only diverge significantly in their assessment of relative conformational energies, but none of them provide satisfactory agreement with experiment. CONCLUSIONS: For Taxol, molecular mechanics and semiempirical QM methods are unable to provide a consistent energetic ranking of side-chain conformations. For similar highly polar organic structures, "energy-free" conformational search methods are advised.

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The data shown below were compiled from readership statistics for 7 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
United Kingdom 1 14%
Unknown 6 86%

Demographic breakdown

Readers by professional status Count As %
Researcher 4 57%
Student > Ph. D. Student 2 29%
Student > Bachelor 1 14%
Readers by discipline Count As %
Chemistry 6 86%
Agricultural and Biological Sciences 1 14%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 1. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 03 December 2019.
All research outputs
#20,656,161
of 25,374,647 outputs
Outputs from BMC Molecular and Cell Biology
#935
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Outputs of similar age
#42,713
of 44,625 outputs
Outputs of similar age from BMC Molecular and Cell Biology
#3
of 3 outputs
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