Title |
BrassicaTED - a public database for utilization of miniature transposable elements in Brassica species
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Published in |
BMC Research Notes, June 2014
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DOI | 10.1186/1756-0500-7-379 |
Pubmed ID | |
Authors |
Jayakodi Murukarthick, Perumal Sampath, Sang Choon Lee, Beom-Soon Choi, Natesan Senthil, Shengyi Liu, Tae-Jin Yang |
Abstract |
MITE, TRIM and SINEs are miniature form transposable elements (mTEs) that are ubiquitous and dispersed throughout entire plant genomes. Tens of thousands of members cause insertion polymorphism at both the inter- and intra- species level. Therefore, mTEs are valuable targets and resources for development of markers that can be utilized for breeding, genetic diversity and genome evolution studies. Taking advantage of the completely sequenced genomes of Brassica rapa and B. oleracea, characterization of mTEs and building a curated database are prerequisite to extending their utilization for genomics and applied fields in Brassica crops. |
X Demographics
Geographical breakdown
Country | Count | As % |
---|---|---|
Unknown | 1 | 100% |
Demographic breakdown
Type | Count | As % |
---|---|---|
Members of the public | 1 | 100% |
Mendeley readers
Geographical breakdown
Country | Count | As % |
---|---|---|
Australia | 2 | 7% |
India | 1 | 3% |
Unknown | 26 | 90% |
Demographic breakdown
Readers by professional status | Count | As % |
---|---|---|
Researcher | 10 | 34% |
Student > Ph. D. Student | 5 | 17% |
Professor | 3 | 10% |
Student > Master | 2 | 7% |
Student > Doctoral Student | 1 | 3% |
Other | 1 | 3% |
Unknown | 7 | 24% |
Readers by discipline | Count | As % |
---|---|---|
Agricultural and Biological Sciences | 15 | 52% |
Environmental Science | 1 | 3% |
Veterinary Science and Veterinary Medicine | 1 | 3% |
Computer Science | 1 | 3% |
Medicine and Dentistry | 1 | 3% |
Other | 0 | 0% |
Unknown | 10 | 34% |