Title |
Comparing reference-based RNA-Seq mapping methods for non-human primate data
|
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Published in |
BMC Genomics, July 2014
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DOI | 10.1186/1471-2164-15-570 |
Pubmed ID | |
Authors |
Ashlee M Benjamin, Marshall Nichols, Thomas W Burke, Geoffrey S Ginsburg, Joseph E Lucas |
Abstract |
The application of next-generation sequencing technology to gene expression quantification analysis, namely, RNA-Sequencing, has transformed the way in which gene expression studies are conducted and analyzed. These advances are of particular interest to researchers studying organisms with missing or incomplete genomes, as the need for knowledge of sequence information is overcome. De novo assembly methods have gained widespread acceptance in the RNA-Seq community for organisms with no true reference genome or transcriptome. While such methods have tremendous utility, computational cost is still a significant challenge for organisms with large and complex genomes. |
X Demographics
Geographical breakdown
Country | Count | As % |
---|---|---|
United Kingdom | 1 | 33% |
United States | 1 | 33% |
Unknown | 1 | 33% |
Demographic breakdown
Type | Count | As % |
---|---|---|
Scientists | 2 | 67% |
Members of the public | 1 | 33% |
Mendeley readers
Geographical breakdown
Country | Count | As % |
---|---|---|
United States | 3 | 3% |
Germany | 1 | <1% |
Norway | 1 | <1% |
France | 1 | <1% |
Spain | 1 | <1% |
Brazil | 1 | <1% |
Unknown | 103 | 93% |
Demographic breakdown
Readers by professional status | Count | As % |
---|---|---|
Student > Ph. D. Student | 25 | 23% |
Researcher | 25 | 23% |
Student > Master | 18 | 16% |
Student > Bachelor | 8 | 7% |
Professor > Associate Professor | 5 | 5% |
Other | 14 | 13% |
Unknown | 16 | 14% |
Readers by discipline | Count | As % |
---|---|---|
Agricultural and Biological Sciences | 46 | 41% |
Biochemistry, Genetics and Molecular Biology | 30 | 27% |
Computer Science | 6 | 5% |
Immunology and Microbiology | 3 | 3% |
Medicine and Dentistry | 3 | 3% |
Other | 6 | 5% |
Unknown | 17 | 15% |