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Of text and gene – using text mining methods to uncover hidden knowledge in toxicogenomics

Overview of attention for article published in BMC Systems Biology, August 2014
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2 X users

Citations

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13 Dimensions

Readers on

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42 Mendeley
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Title
Of text and gene – using text mining methods to uncover hidden knowledge in toxicogenomics
Published in
BMC Systems Biology, August 2014
DOI 10.1186/s12918-014-0093-3
Pubmed ID
Authors

Mikyung Lee, Zhichao Liu, Reagan Kelly, Weida Tong

Abstract

Toxicogenomics studies often profile gene expression from assays involving multiple doses and time points. The dose- and time-dependent pattern is of great importance to assess toxicity but computational approaches are lacking to effectively utilize this characteristic in toxicity assessment. Topic modeling is a text mining approach, but may be used analogously in toxicogenomics due to the similar data structures between text and gene dysregulation.

X Demographics

X Demographics

The data shown below were collected from the profiles of 2 X users who shared this research output. Click here to find out more about how the information was compiled.
Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 42 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Spain 1 2%
United States 1 2%
Unknown 40 95%

Demographic breakdown

Readers by professional status Count As %
Researcher 11 26%
Student > Master 5 12%
Student > Ph. D. Student 5 12%
Professor 3 7%
Student > Doctoral Student 3 7%
Other 4 10%
Unknown 11 26%
Readers by discipline Count As %
Computer Science 11 26%
Agricultural and Biological Sciences 6 14%
Biochemistry, Genetics and Molecular Biology 3 7%
Business, Management and Accounting 2 5%
Medicine and Dentistry 2 5%
Other 6 14%
Unknown 12 29%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 1. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 14 August 2014.
All research outputs
#15,303,896
of 22,760,687 outputs
Outputs from BMC Systems Biology
#644
of 1,142 outputs
Outputs of similar age
#133,642
of 231,138 outputs
Outputs of similar age from BMC Systems Biology
#13
of 25 outputs
Altmetric has tracked 22,760,687 research outputs across all sources so far. This one is in the 22nd percentile – i.e., 22% of other outputs scored the same or lower than it.
So far Altmetric has tracked 1,142 research outputs from this source. They receive a mean Attention Score of 3.6. This one is in the 32nd percentile – i.e., 32% of its peers scored the same or lower than it.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 231,138 tracked outputs that were published within six weeks on either side of this one in any source. This one is in the 32nd percentile – i.e., 32% of its contemporaries scored the same or lower than it.
We're also able to compare this research output to 25 others from the same source and published within six weeks on either side of this one. This one is in the 40th percentile – i.e., 40% of its contemporaries scored the same or lower than it.