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T-KDE: a method for genome-wide identification of constitutive protein binding sites from multiple ChIP-seq data sets

Overview of attention for article published in BMC Genomics, January 2014
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Title
T-KDE: a method for genome-wide identification of constitutive protein binding sites from multiple ChIP-seq data sets
Published in
BMC Genomics, January 2014
DOI 10.1186/1471-2164-15-27
Pubmed ID
Authors

Yuanyuan Li, David M Umbach, Leping Li

Abstract

A protein may bind to its target DNA sites constitutively, i.e., regardless of cell type. Intuitively, constitutive binding sites should be biologically functional. A prerequisite for understanding their functional relevance is knowing all their locations for a protein of interest. Genome-wide discovery of constitutive binding sites requires robust and efficient computational methods to integrate results from numerous binding experiments. Such methods are lacking, however.

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The data shown below were collected from the profile of 1 X user who shared this research output. Click here to find out more about how the information was compiled.
Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 22 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
United Kingdom 1 5%
Unknown 21 95%

Demographic breakdown

Readers by professional status Count As %
Student > Ph. D. Student 7 32%
Researcher 5 23%
Other 2 9%
Student > Master 2 9%
Student > Bachelor 1 5%
Other 4 18%
Unknown 1 5%
Readers by discipline Count As %
Agricultural and Biological Sciences 11 50%
Biochemistry, Genetics and Molecular Biology 4 18%
Medicine and Dentistry 4 18%
Decision Sciences 2 9%
Unknown 1 5%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 1. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 30 August 2014.
All research outputs
#22,759,452
of 25,374,647 outputs
Outputs from BMC Genomics
#9,840
of 11,244 outputs
Outputs of similar age
#295,843
of 336,899 outputs
Outputs of similar age from BMC Genomics
#184
of 218 outputs
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So far Altmetric has tracked 11,244 research outputs from this source. They receive a mean Attention Score of 4.8. This one is in the 1st percentile – i.e., 1% of its peers scored the same or lower than it.
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We're also able to compare this research output to 218 others from the same source and published within six weeks on either side of this one. This one is in the 1st percentile – i.e., 1% of its contemporaries scored the same or lower than it.