Title |
A multiple genome analysis of Mycobacterium tuberculosis reveals specific novel genes and mutations associated with pyrazinamide resistance
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Published in |
BMC Genomics, October 2017
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DOI | 10.1186/s12864-017-4146-z |
Pubmed ID | |
Authors |
Patricia Sheen, David Requena, Eduardo Gushiken, Robert H. Gilman, Ricardo Antiparra, Bryan Lucero, Pilar Lizárraga, Basilio Cieza, Elisa Roncal, Louis Grandjean, Arnab Pain, Ruth McNerney, Taane G. Clark, David Moore, Mirko Zimic |
Abstract |
Tuberculosis (TB) is a major global health problem and drug resistance compromises the efforts to control this disease. Pyrazinamide (PZA) is an important drug used in both first and second line treatment regimes. However, its complete mechanism of action and resistance remains unclear. We genotyped and sequenced the complete genomes of 68 M. tuberculosis strains isolated from unrelated TB patients in Peru. No clustering pattern of the strains was verified based on spoligotyping. We analyzed the association between PZA resistance with non-synonymous mutations and specific genes. We found mutations in pncA and novel genes significantly associated with PZA resistance in strains without pncA mutations. These included genes related to transportation of metal ions, pH regulation and immune system evasion. These results suggest potential alternate mechanisms of PZA resistance that have not been found in other populations, supporting that the antibacterial activity of PZA may hit multiple targets. |
X Demographics
Geographical breakdown
Country | Count | As % |
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Denmark | 1 | 25% |
United Kingdom | 1 | 25% |
Unknown | 2 | 50% |
Demographic breakdown
Type | Count | As % |
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Members of the public | 4 | 100% |
Mendeley readers
Geographical breakdown
Country | Count | As % |
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Unknown | 134 | 100% |
Demographic breakdown
Readers by professional status | Count | As % |
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Student > Bachelor | 27 | 20% |
Researcher | 22 | 16% |
Student > Master | 18 | 13% |
Student > Ph. D. Student | 14 | 10% |
Professor | 7 | 5% |
Other | 17 | 13% |
Unknown | 29 | 22% |
Readers by discipline | Count | As % |
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Biochemistry, Genetics and Molecular Biology | 41 | 31% |
Agricultural and Biological Sciences | 21 | 16% |
Medicine and Dentistry | 13 | 10% |
Immunology and Microbiology | 12 | 9% |
Arts and Humanities | 3 | 2% |
Other | 8 | 6% |
Unknown | 36 | 27% |