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Genome sequence of Coxiella burnetii strain Namibia

Overview of attention for article published in Environmental Microbiome, December 2014
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Title
Genome sequence of Coxiella burnetii strain Namibia
Published in
Environmental Microbiome, December 2014
DOI 10.1186/1944-3277-9-22
Pubmed ID
Authors

Mathias C Walter, Caroline Öhrman, Kerstin Myrtennäs, Andreas Sjödin, Mona Byström, Pär Larsson, Anna Macellaro, Mats Forsman, Dimitrios Frangoulidis

Abstract

We present the whole genome sequence and annotation of the Coxiella burnetii strain Namibia. This strain was isolated from an aborting goat in 1991 in Windhoek, Namibia. The plasmid type QpRS was confirmed in our work. Further genomic typing placed the strain into a unique genomic group. The genome sequence is 2,101,438 bp long and contains 1,979 protein-coding and 51 RNA genes, including one rRNA operon. To overcome the poor yield from cell culture systems, an additional DNA enrichment with whole genome amplification (WGA) methods was applied. We describe a bioinformatics pipeline for improved genome assembly including several filters with a special focus on WGA characteristics.

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The data shown below were collected from the profile of 1 X user who shared this research output. Click here to find out more about how the information was compiled.
Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 38 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Mexico 1 3%
Denmark 1 3%
Unknown 36 95%

Demographic breakdown

Readers by professional status Count As %
Student > Doctoral Student 7 18%
Student > Ph. D. Student 5 13%
Researcher 5 13%
Student > Master 4 11%
Professor 3 8%
Other 5 13%
Unknown 9 24%
Readers by discipline Count As %
Agricultural and Biological Sciences 11 29%
Veterinary Science and Veterinary Medicine 9 24%
Immunology and Microbiology 3 8%
Biochemistry, Genetics and Molecular Biology 3 8%
Environmental Science 1 3%
Other 2 5%
Unknown 9 24%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 1. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 17 January 2015.
All research outputs
#22,758,309
of 25,373,627 outputs
Outputs from Environmental Microbiome
#720
of 786 outputs
Outputs of similar age
#306,923
of 359,996 outputs
Outputs of similar age from Environmental Microbiome
#13
of 14 outputs
Altmetric has tracked 25,373,627 research outputs across all sources so far. This one is in the 1st percentile – i.e., 1% of other outputs scored the same or lower than it.
So far Altmetric has tracked 786 research outputs from this source. They receive a mean Attention Score of 4.8. This one is in the 1st percentile – i.e., 1% of its peers scored the same or lower than it.
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We're also able to compare this research output to 14 others from the same source and published within six weeks on either side of this one. This one is in the 1st percentile – i.e., 1% of its contemporaries scored the same or lower than it.