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Enhanced fluorescent properties of an OmpT site deleted mutant of Green Fluorescent Protein

Overview of attention for article published in Microbial Cell Factories, April 2010
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Title
Enhanced fluorescent properties of an OmpT site deleted mutant of Green Fluorescent Protein
Published in
Microbial Cell Factories, April 2010
DOI 10.1186/1475-2859-9-26
Pubmed ID
Authors

Shardul S Salunkhe, Veena A Raiker, Sachin Rewanwar, Prakash Kotwal, Avijeet Kumar, Sriram Padmanabhan

Abstract

The green fluorescent protein has revolutionized many areas of cell biology and biotechnology since it is widely used in determining gene expression and for localization of protein expression. Expression of recombinant GFP in E. coli K12 host from pBAD24M-GFP construct upon arabinose induction was significantly lower than that seen in E. coli B cells with higher expression at 30 degrees C as compared to 37 degrees C in E. coli K12 hosts. Since OmpT levels are higher at 37 degrees C than at 30 degrees C, it prompted us to modify the OmpT proteolytic sites of GFP and examine such an effect on GFP expression and fluorescence. Upon modification of one of the two putative OmpT cleavage sites of GFP, we observed several folds enhanced fluorescence of GFP as compared to unmodified GFPuv (Wild Type-WT). The western blot studies of the WT and the SDM II GFP mutant using anti-GFP antibody showed prominent degradation of GFP with negligible degradation in case of SDM II GFP mutant while no such degradation of GFP was seen for both the clones when expressed in BL21 cells. The SDM II GFP mutant also showed enhanced GFP fluorescence in other E. coli K12 OmpT hosts like E. coli JM109 and LE 392 in comparison to WT GFPuv. Inclusion of an OmpT inhibitor, like zinc with WT GFP lysate expressed from an E. coli K12 host was found to reduce degradation of GFP fluorescence by two fold.

Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 47 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Germany 2 4%
Finland 1 2%
Australia 1 2%
Unknown 43 91%

Demographic breakdown

Readers by professional status Count As %
Researcher 11 23%
Student > Bachelor 10 21%
Student > Master 6 13%
Student > Ph. D. Student 6 13%
Student > Postgraduate 3 6%
Other 4 9%
Unknown 7 15%
Readers by discipline Count As %
Agricultural and Biological Sciences 19 40%
Biochemistry, Genetics and Molecular Biology 13 28%
Medicine and Dentistry 4 9%
Unspecified 1 2%
Physics and Astronomy 1 2%
Other 3 6%
Unknown 6 13%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 3. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 05 October 2010.
All research outputs
#7,451,584
of 22,780,967 outputs
Outputs from Microbial Cell Factories
#535
of 1,597 outputs
Outputs of similar age
#34,384
of 95,468 outputs
Outputs of similar age from Microbial Cell Factories
#5
of 10 outputs
Altmetric has tracked 22,780,967 research outputs across all sources so far. This one is in the 44th percentile – i.e., 44% of other outputs scored the same or lower than it.
So far Altmetric has tracked 1,597 research outputs from this source. They receive a mean Attention Score of 4.4. This one has gotten more attention than average, scoring higher than 52% of its peers.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 95,468 tracked outputs that were published within six weeks on either side of this one in any source. This one is in the 23rd percentile – i.e., 23% of its contemporaries scored the same or lower than it.
We're also able to compare this research output to 10 others from the same source and published within six weeks on either side of this one. This one has scored higher than 5 of them.