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Analysis of lineage-specific Alu subfamilies in the genome of the olive baboon, Papio anubis

Overview of attention for article published in Mobile DNA, March 2018
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  • Above-average Attention Score compared to outputs of the same age (51st percentile)
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Title
Analysis of lineage-specific Alu subfamilies in the genome of the olive baboon, Papio anubis
Published in
Mobile DNA, March 2018
DOI 10.1186/s13100-018-0115-6
Pubmed ID
Authors

Cody J. Steely, Jasmine N. Baker, Jerilyn A. Walker, Charles D. Loupe, The Baboon Genome Analysis Consortium, Mark A. Batzer

Abstract

Alu elements are primate-specific retroposons that mobilize using the enzymatic machinery of L1 s. The recently completed baboon genome project found that the mobilization rate of Alu elements is higher than in the genome of any other primate studied thus far. However, the Alu subfamily structure present in and specific to baboons had not been examined yet. Here we report 129 Alu subfamilies that are propagating in the genome of the olive baboon, with 127 of these subfamilies being new and specific to the baboon lineage. We analyzed 233 Alu insertions in the genome of the olive baboon using locus specific polymerase chain reaction assays, covering 113 of the 129 subfamilies. The allele frequency data from these insertions show that none of the nine groups of subfamilies are nearing fixation in the lineage. Many subfamilies of Alu elements are actively mobilizing throughout the baboon lineage, with most being specific to the baboon lineage.

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Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 21 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Unknown 21 100%

Demographic breakdown

Readers by professional status Count As %
Student > Master 4 19%
Student > Doctoral Student 2 10%
Professor 2 10%
Student > Ph. D. Student 2 10%
Researcher 2 10%
Other 2 10%
Unknown 7 33%
Readers by discipline Count As %
Agricultural and Biological Sciences 7 33%
Biochemistry, Genetics and Molecular Biology 6 29%
Medicine and Dentistry 1 5%
Engineering 1 5%
Unknown 6 29%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 3. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 19 January 2022.
All research outputs
#13,626,681
of 24,162,141 outputs
Outputs from Mobile DNA
#219
of 344 outputs
Outputs of similar age
#160,914
of 336,105 outputs
Outputs of similar age from Mobile DNA
#8
of 10 outputs
Altmetric has tracked 24,162,141 research outputs across all sources so far. This one is in the 43rd percentile – i.e., 43% of other outputs scored the same or lower than it.
So far Altmetric has tracked 344 research outputs from this source. They typically receive more attention than average, with a mean Attention Score of 8.2. This one is in the 34th percentile – i.e., 34% of its peers scored the same or lower than it.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 336,105 tracked outputs that were published within six weeks on either side of this one in any source. This one has gotten more attention than average, scoring higher than 51% of its contemporaries.
We're also able to compare this research output to 10 others from the same source and published within six weeks on either side of this one. This one has scored higher than 2 of them.