↓ Skip to main content

Building a protein name dictionary from full text: a machine learning term extraction approach

Overview of attention for article published in BMC Bioinformatics, April 2005
Altmetric Badge

About this Attention Score

  • In the top 25% of all research outputs scored by Altmetric
  • Good Attention Score compared to outputs of the same age (71st percentile)
  • Average Attention Score compared to outputs of the same age and source

Mentioned by

patent
1 patent
wikipedia
1 Wikipedia page

Readers on

mendeley
56 Mendeley
citeulike
7 CiteULike
You are seeing a free-to-access but limited selection of the activity Altmetric has collected about this research output. Click here to find out more.
Title
Building a protein name dictionary from full text: a machine learning term extraction approach
Published in
BMC Bioinformatics, April 2005
DOI 10.1186/1471-2105-6-88
Pubmed ID
Authors

Lei Shi, Fabien Campagne

Abstract

The majority of information in the biological literature resides in full text articles, instead of abstracts. Yet, abstracts remain the focus of many publicly available literature data mining tools. Most literature mining tools rely on pre-existing lexicons of biological names, often extracted from curated gene or protein databases. This is a limitation, because such databases have low coverage of the many name variants which are used to refer to biological entities in the literature.

Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 56 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
United States 3 5%
Portugal 1 2%
Brazil 1 2%
France 1 2%
Russia 1 2%
United Kingdom 1 2%
Unknown 48 86%

Demographic breakdown

Readers by professional status Count As %
Researcher 11 20%
Student > Ph. D. Student 9 16%
Student > Doctoral Student 5 9%
Professor > Associate Professor 5 9%
Student > Master 5 9%
Other 11 20%
Unknown 10 18%
Readers by discipline Count As %
Computer Science 18 32%
Agricultural and Biological Sciences 10 18%
Linguistics 3 5%
Medicine and Dentistry 3 5%
Arts and Humanities 2 4%
Other 9 16%
Unknown 11 20%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 6. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 17 October 2013.
All research outputs
#4,696,781
of 22,789,566 outputs
Outputs from BMC Bioinformatics
#1,810
of 7,280 outputs
Outputs of similar age
#10,503
of 59,622 outputs
Outputs of similar age from BMC Bioinformatics
#3
of 6 outputs
Altmetric has tracked 22,789,566 research outputs across all sources so far. Compared to these this one has done well and is in the 76th percentile: it's in the top 25% of all research outputs ever tracked by Altmetric.
So far Altmetric has tracked 7,280 research outputs from this source. They typically receive a little more attention than average, with a mean Attention Score of 5.4. This one has gotten more attention than average, scoring higher than 73% of its peers.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 59,622 tracked outputs that were published within six weeks on either side of this one in any source. This one has gotten more attention than average, scoring higher than 71% of its contemporaries.
We're also able to compare this research output to 6 others from the same source and published within six weeks on either side of this one. This one has scored higher than 3 of them.