Title |
NetworkPainter: dynamic intracellular pathway animation in Cytobank
|
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Published in |
BMC Bioinformatics, May 2015
|
DOI | 10.1186/s12859-015-0602-4 |
Pubmed ID | |
Authors |
Jonathan R Karr, Harendra Guturu, Edward Y Chen, Stuart L Blair, Jonathan M Irish, Nikesh Kotecha, Markus W Covert |
Abstract |
High-throughput technologies such as flow and mass cytometry have the potential to illuminate cellular networks. However, analyzing the data produced by these technologies is challenging. Visualization is needed to help researchers explore this data. We developed a web-based software program, NetworkPainter, to enable researchers to analyze dynamic cytometry data in the context of pathway diagrams. NetworkPainter provides researchers a graphical interface to draw and "paint" pathway diagrams with experimental data, producing animated diagrams which display the activity of each network node at each time point. NetworkPainter enables researchers to more fully explore multi-parameter, dynamical cytometry data. |
X Demographics
Geographical breakdown
Country | Count | As % |
---|---|---|
United States | 3 | 23% |
Japan | 1 | 8% |
Spain | 1 | 8% |
France | 1 | 8% |
Norway | 1 | 8% |
Unknown | 6 | 46% |
Demographic breakdown
Type | Count | As % |
---|---|---|
Scientists | 7 | 54% |
Members of the public | 6 | 46% |
Mendeley readers
Geographical breakdown
Country | Count | As % |
---|---|---|
Cuba | 1 | 1% |
Brazil | 1 | 1% |
Taiwan | 1 | 1% |
Russia | 1 | 1% |
United States | 1 | 1% |
Luxembourg | 1 | 1% |
Unknown | 61 | 91% |
Demographic breakdown
Readers by professional status | Count | As % |
---|---|---|
Student > Ph. D. Student | 22 | 33% |
Researcher | 21 | 31% |
Professor > Associate Professor | 5 | 7% |
Student > Master | 5 | 7% |
Other | 4 | 6% |
Other | 6 | 9% |
Unknown | 4 | 6% |
Readers by discipline | Count | As % |
---|---|---|
Agricultural and Biological Sciences | 28 | 42% |
Biochemistry, Genetics and Molecular Biology | 9 | 13% |
Immunology and Microbiology | 7 | 10% |
Computer Science | 6 | 9% |
Medicine and Dentistry | 6 | 9% |
Other | 8 | 12% |
Unknown | 3 | 4% |