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PIGS: improved estimates of identity-by-descent probabilities by probabilistic IBD graph sampling

Overview of attention for article published in BMC Bioinformatics, March 2015
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Title
PIGS: improved estimates of identity-by-descent probabilities by probabilistic IBD graph sampling
Published in
BMC Bioinformatics, March 2015
DOI 10.1186/1471-2105-16-s5-s9
Pubmed ID
Authors

Danny S Park, Yael Baran, Farhad Hormozdiari, Celeste Eng, Dara G Torgerson, Esteban G Burchard, Noah Zaitlen

Abstract

Identifying segments in the genome of different individuals that are identical-by-descent (IBD) is a fundamental element of genetics. IBD data is used for numerous applications including demographic inference, heritability estimation, and mapping disease loci. Simultaneous detection of IBD over multiple haplotypes has proven to be computationally difficult. To overcome this, many state of the art methods estimate the probability of IBD between each pair of haplotypes separately. While computationally efficient, these methods fail to leverage the clique structure of IBD resulting in less powerful IBD identification, especially for small IBD segments.

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X Demographics

The data shown below were collected from the profile of 1 X user who shared this research output. Click here to find out more about how the information was compiled.
Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 21 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
United States 1 5%
Unknown 20 95%

Demographic breakdown

Readers by professional status Count As %
Student > Ph. D. Student 9 43%
Student > Master 4 19%
Student > Bachelor 3 14%
Researcher 2 10%
Professor > Associate Professor 1 5%
Other 0 0%
Unknown 2 10%
Readers by discipline Count As %
Agricultural and Biological Sciences 7 33%
Biochemistry, Genetics and Molecular Biology 4 19%
Medicine and Dentistry 4 19%
Computer Science 2 10%
Pharmacology, Toxicology and Pharmaceutical Science 1 5%
Other 0 0%
Unknown 3 14%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 1. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 29 July 2015.
All research outputs
#20,284,384
of 22,818,766 outputs
Outputs from BMC Bioinformatics
#6,855
of 7,284 outputs
Outputs of similar age
#242,124
of 285,959 outputs
Outputs of similar age from BMC Bioinformatics
#134
of 141 outputs
Altmetric has tracked 22,818,766 research outputs across all sources so far. This one is in the 1st percentile – i.e., 1% of other outputs scored the same or lower than it.
So far Altmetric has tracked 7,284 research outputs from this source. They typically receive a little more attention than average, with a mean Attention Score of 5.4. This one is in the 1st percentile – i.e., 1% of its peers scored the same or lower than it.
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We're also able to compare this research output to 141 others from the same source and published within six weeks on either side of this one. This one is in the 1st percentile – i.e., 1% of its contemporaries scored the same or lower than it.