Title |
Draft genome sequence of the extremely halophilic archaeon Haladaptatus cibarius type strain D43T isolated from fermented seafood
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Published in |
Environmental Microbiome, August 2015
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DOI | 10.1186/s40793-015-0051-8 |
Pubmed ID | |
Authors |
Hae-Won Lee, Dae-Won Kim, Mi-Hwa Lee, Byung-Yong Kim, Yong-Joon Cho, Kyung June Yim, Hye Seon Song, Jin-Kyu Rhee, Myung-Ji Seo, Hak-Jong Choi, Jong-Soon Choi, Dong-Gi Lee, Changmann Yoon, Young-Do Nam, Seong Woon Roh |
Abstract |
An extremely halophilic archaeon, Haladaptatus cibarius D43(T), was isolated from traditional Korean salt-rich fermented seafood. Strain D43(T) shows the highest 16S rRNA gene sequence similarity (98.7 %) with Haladaptatus litoreus RO1-28(T), is Gram-negative staining, motile, and extremely halophilic. Despite potential industrial applications of extremely halophilic archaea, their genome characteristics remain obscure. Here, we describe the whole genome sequence and annotated features of strain D43(T). The 3,926,724 bp genome includes 4,092 protein-coding and 57 RNA genes (including 6 rRNA and 49 tRNA genes) with an average G + C content of 57.76 %. |
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Unknown | 2 | 100% |
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Members of the public | 2 | 100% |
Mendeley readers
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United Kingdom | 1 | 9% |
Unknown | 10 | 91% |
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Student > Bachelor | 2 | 18% |
Student > Master | 2 | 18% |
Professor > Associate Professor | 2 | 18% |
Researcher | 1 | 9% |
Student > Ph. D. Student | 1 | 9% |
Other | 0 | 0% |
Unknown | 3 | 27% |
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Biochemistry, Genetics and Molecular Biology | 1 | 9% |
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Engineering | 1 | 9% |
Other | 0 | 0% |
Unknown | 3 | 27% |