Title |
Improved-high-quality draft genome sequence of Rhodococcus sp. JG-3, a eurypsychrophilic Actinobacteria from Antarctic Dry Valley permafrost
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Published in |
Environmental Microbiome, September 2015
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DOI | 10.1186/s40793-015-0043-8 |
Pubmed ID | |
Authors |
Jacqueline Goordial, Isabelle Raymond-Bouchard, Jennifer Ronholm, Nicole Shapiro, Tanja Woyke, Lyle Whyte, Corien Bakermans |
Abstract |
The actinobacterium Rhodococcus sp. JG-3 is an aerobic, eurypsychrophilic, soil bacterium isolated from permafrost in the hyper arid Upper Dry Valleys of Antarctica. It is yellow pigmented, gram positive, moderately halotolerant and capable of growth from 30 °C down to at least -5 °C. The 5.28 Mb high-quality-draft genome is arranged into 6 scaffolds, containing 9 contigs and 4998 protein coding genes, with 64 % GC content. Increasing the availability of genome sequences from cold-adapted species is crucial to gaining a better understanding of the molecular traits of cold adaptation in microbes. |
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Unknown | 4 | 100% |
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Members of the public | 4 | 100% |
Mendeley readers
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Unknown | 27 | 100% |
Demographic breakdown
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Student > Ph. D. Student | 7 | 26% |
Student > Master | 5 | 19% |
Researcher | 5 | 19% |
Student > Bachelor | 4 | 15% |
Other | 2 | 7% |
Other | 1 | 4% |
Unknown | 3 | 11% |
Readers by discipline | Count | As % |
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Agricultural and Biological Sciences | 6 | 22% |
Environmental Science | 4 | 15% |
Biochemistry, Genetics and Molecular Biology | 4 | 15% |
Immunology and Microbiology | 3 | 11% |
Chemical Engineering | 1 | 4% |
Other | 4 | 15% |
Unknown | 5 | 19% |