Title |
Complete genome sequence of the thermophilic Thermus sp. CCB_US3_UF1 from a hot spring in Malaysia
|
---|---|
Published in |
Environmental Microbiome, October 2015
|
DOI | 10.1186/s40793-015-0053-6 |
Pubmed ID | |
Authors |
Beng Soon Teh, Nyok-Sean Lau, Fui Ling Ng, Ahmad Yamin Abdul Rahman, Xuehua Wan, Jennifer A. Saito, Shaobin Hou, Aik-Hong Teh, Nazalan Najimudin, Maqsudul Alam |
Abstract |
Thermus sp. strain CCB_US3_UF1 is a thermophilic bacterium of the genus Thermus, a member of the family Thermaceae. Members of the genus Thermus have been widely used as a biological model for structural biology studies and to understand the mechanism of microbial adaptation under thermal environments. Here, we present the complete genome sequence of Thermus sp. CCB_US3_UF1 isolated from a hot spring in Malaysia, which is the fifth member of the genus Thermus with a completely sequenced and publicly available genome (Genbank date of release: December 2, 2011). Thermus sp. CCB_US3_UF1 has the third largest genome within the genus. The complete genome comprises of a chromosome of 2.26 Mb and a plasmid of 19.7 kb. The genome contains 2279 protein-coding and 54 RNA genes. In addition, its genome revealed potential pathways for the synthesis of secondary metabolites (isoprenoid) and pigments (carotenoid). |
Mendeley readers
Geographical breakdown
Country | Count | As % |
---|---|---|
Unknown | 26 | 100% |
Demographic breakdown
Readers by professional status | Count | As % |
---|---|---|
Student > Ph. D. Student | 5 | 19% |
Student > Master | 4 | 15% |
Researcher | 2 | 8% |
Student > Doctoral Student | 2 | 8% |
Professor | 1 | 4% |
Other | 2 | 8% |
Unknown | 10 | 38% |
Readers by discipline | Count | As % |
---|---|---|
Biochemistry, Genetics and Molecular Biology | 8 | 31% |
Agricultural and Biological Sciences | 4 | 15% |
Environmental Science | 1 | 4% |
Chemical Engineering | 1 | 4% |
Immunology and Microbiology | 1 | 4% |
Other | 0 | 0% |
Unknown | 11 | 42% |