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Maybe it's because they are bedGraph files and NOT bed files. Why don't you try aligning the raw reads like a normal human being and then come to your conclusions.
Maybe it's because they are bedGraph files and NOT bed files. Why don't you try aligning the raw reads like a normal human being and then come to your conclusions.
Did someone figure out about the supplementary data (GEO)?File formatting makes very little sense. For example, in the bedgraphs provided, sometimes a chromosome is named "1", sometimes "chr1"...