Title |
The miRNAome of globe artichoke: conserved and novel micro RNAs and target analysis
|
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Published in |
BMC Genomics, January 2012
|
DOI | 10.1186/1471-2164-13-41 |
Pubmed ID | |
Authors |
Domenico De Paola, Federica Cattonaro, Domenico Pignone, Gabriella Sonnante |
Abstract |
Plant microRNAs (miRNAs) are involved in post-transcriptional regulatory mechanisms of several processes, including the response to biotic and abiotic stress, often contributing to the adaptive response of the plant to adverse conditions. In addition to conserved miRNAs, found in a wide range of plant species a number of novel species-specific miRNAs, displaying lower levels of expression can be found. Due to low abundance, non conserved miRNAs are difficult to identify and isolate using conventional approaches. Conversely, deep-sequencing of small RNA (sRNA) libraries can detect even poorly expressed miRNAs.No miRNAs from globe artichoke have been described to date. We analyzed the miRNAome from artichoke by deep sequencing four sRNA libraries obtained from NaCl stressed and control leaves and roots. |
X Demographics
Geographical breakdown
Country | Count | As % |
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United Kingdom | 1 | 50% |
Germany | 1 | 50% |
Demographic breakdown
Type | Count | As % |
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Scientists | 2 | 100% |
Mendeley readers
Geographical breakdown
Country | Count | As % |
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Italy | 2 | 3% |
Germany | 1 | 1% |
Norway | 1 | 1% |
Chile | 1 | 1% |
Brazil | 1 | 1% |
China | 1 | 1% |
Unknown | 70 | 91% |
Demographic breakdown
Readers by professional status | Count | As % |
---|---|---|
Student > Ph. D. Student | 22 | 29% |
Researcher | 19 | 25% |
Student > Master | 8 | 10% |
Student > Postgraduate | 7 | 9% |
Student > Doctoral Student | 5 | 6% |
Other | 9 | 12% |
Unknown | 7 | 9% |
Readers by discipline | Count | As % |
---|---|---|
Agricultural and Biological Sciences | 54 | 70% |
Biochemistry, Genetics and Molecular Biology | 6 | 8% |
Environmental Science | 3 | 4% |
Mathematics | 1 | 1% |
Nursing and Health Professions | 1 | 1% |
Other | 4 | 5% |
Unknown | 8 | 10% |